| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1778 |
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| Symbol | rho |
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| ID | 8368224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2117488 |
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| End bp | 2119137 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984218 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003141884 |
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| Protein GI | 256820605 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAACA TTGTAGAGTT AAAATCTAAA AAGCTAACTG AGTTACAGGA AATAGCAAAA
CATTTGGATA TACCTAAATT TCGGTATGTA AATAAGCCTG AACTCATAGA CCTAATTCTA
AAAAATCAAA AAAAAGAACT CCCCAACAAA AAAGAAGAAG TTCAAAACGA CAATTCTCCT
ATTATTACAA CTGAGAACAC AACTGAATCC AAAAAAAACA GTCGTAAAAA GAAAATAGAA
ATACCTCAAA AAGTAGGCAG TTCTAAACAA GAAAAGACTT CAAAAACACC AACCGTTAAA
AAGGTTTCTT CGGCAGATGA ATCTAAAACG TATCAGAAGA AAAACACTAC TTCTGTTGTT
TCTAACAATC ATCAGAATAA TGCTACCCCA ACAAAAAACT ACAGTTCCCC TGTACAAAAT
GGCAATGGCA ATAATGGTAA TTACAATCAA AATGTGAACA ATGGTAATAC TATTGTTAAT
AATGAGAATT TTGATAAAGA AAAGAAAAAC CGTTATCGCG CCCCCGATTT TGAATTTGAC
AGCGTGGTAG ACTGCGAAGG GGTTTTAGAA ATCACTTCTG ACGGTTATGG TTTCTTGCGT
TCTTCGGACT ATAACTATTT GGCTTCACCT GATGATATTT ACGTATCTTC TTCACAAATC
CGACTTTTTG GCTTGCAAAC AGGAGATACT GTATATGGAG AAGTGCGTCC GCCTAAAGAT
GGCGAAAAGT ATTATCCGCT ACTAAAAGTT ATAAAGATAA ACGGACTTGA CCCCCAAGTG
GTGCGCGACC GAGTACTATT TGAACACCTT ACGCCTCTTT TTCCTGATGT AAAATTTGAG
TTGGCAGGCA AAGGCTCTAC TGTTTCTACT CGCTTGATAG ACCTTTTTGC TCCTATTGGG
AAAGGACAAC GCGGTATGAT AGTGGCACAA CCTAAGACGG GTAAAACAAT GCTTTTAAAA
GATATTGCGA ATGCCATTAG CAAAAATCAC CCCGAAGTGT ACCTAATGGT ACTCTTGATT
GATGAGCGCC CTGAGGAGGT AACTGATATG CAACGCAGTG TGCGAGGAGA GATTATCTCT
TCGACTTTTG ATAAGGAAGC TGCCGAACAC GTGAAAATAG CTAATATCGT ACTTGAAAAA
GCAAAACGAT TGGTAGAATG TGGTCACGAT GTGGTTATAT TGTTAGACTC TATCACTCGT
TTAGCTCGCG CTTATAACAC AGTGCAACCA GCTTCGGGGA AAGTGCTTAC TGGTGGGGTA
GATGCTAACG CTTTACATAA GCCTAAACGC TTTTTCGGAG CAGCTCGTAA TATTGAAAAC
GGAGGCTCTC TCTCTATCAT CGCTACGGCT CTTACCGAGA CAGGTTCAAA GATGGACGAG
GTAATTTTTG AGGAATTTAA AGGAACGGGT AATATGGAAT TACAATTGGA TAGACGTATT
TCGAATCGTC GTATTTTCCC AGCTATTGAC CTAATAGCTT CGTCTACTCG TAGAGATGAC
TTGTTGCTTG ATGAAAACAC GCTTAATCGC ACTTGGGTAT TACGCAAGTA TTTGGCAGAA
ATGAATCCGA TAGAGGCGAT GGAATTTATG GAAAAGCAAA TTAAGCAAAC GCGCAATAAT
GAAGAGTTTT TGGCAACGAT GAACAATTAG
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| Protein sequence | MLNIVELKSK KLTELQEIAK HLDIPKFRYV NKPELIDLIL KNQKKELPNK KEEVQNDNSP
IITTENTTES KKNSRKKKIE IPQKVGSSKQ EKTSKTPTVK KVSSADESKT YQKKNTTSVV
SNNHQNNATP TKNYSSPVQN GNGNNGNYNQ NVNNGNTIVN NENFDKEKKN RYRAPDFEFD
SVVDCEGVLE ITSDGYGFLR SSDYNYLASP DDIYVSSSQI RLFGLQTGDT VYGEVRPPKD
GEKYYPLLKV IKINGLDPQV VRDRVLFEHL TPLFPDVKFE LAGKGSTVST RLIDLFAPIG
KGQRGMIVAQ PKTGKTMLLK DIANAISKNH PEVYLMVLLI DERPEEVTDM QRSVRGEIIS
STFDKEAAEH VKIANIVLEK AKRLVECGHD VVILLDSITR LARAYNTVQP ASGKVLTGGV
DANALHKPKR FFGAARNIEN GGSLSIIATA LTETGSKMDE VIFEEFKGTG NMELQLDRRI
SNRRIFPAID LIASSTRRDD LLLDENTLNR TWVLRKYLAE MNPIEAMEFM EKQIKQTRNN
EEFLATMNN
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