Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1763 |
Symbol | |
ID | 8368209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2102334 |
End bp | 2102948 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644984203 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_003141869 |
Protein GI | 256820590 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC TCTTAATATT CCTTATTTCT GTTGCACCTT TAACAATCAG TGCCCAAGCC CTTACCGAAG TCCAAATACG CGACTTCAAA ACTCAAACTA TTGCTAAAAA CAAGGTAATT CAAACAATGC AAGCGGATTT TATTCAGAAA AAACACTTAG ATTTTATGAG TAAAGATATT GAGACTTTTG GAAAAATGGC ATTCGCTAAA CCAGATAAAT TGAATTGGCA ATATACAAAA CCTTACCAGT ATCGGATTGT TTTTCAGAAA GATAAAATTA CAGTAAACGA TGCAGGTAAT ATCTCACAGA TGAAGGCCGA TAATAAAGTC TTCAAAAAAA TAAATAACCT CATTGTGAGT TCTATCAGTG GCGATATGTT CAACGAGAAA GAATTTGCTA TGACCTTTGC CAAATCGGGC AAAAGTATAT TGGTAAAACT ATTGCCCAAG GATAAGACGC TTTTGAAATA CGTGAGTGAA ATTCATCTGT ATTTTGATGT TGATAGTGTC GTGGAACGTG TAAAACTCAT AGAACCCTCG AAAGACTACG CCGAAATCTT ATTCAGCAAT AAAAAACTAA ATACAAAAAT TGATGAAGCA AATTTTAAAA TGTAG
|
Protein sequence | MKKLLIFLIS VAPLTISAQA LTEVQIRDFK TQTIAKNKVI QTMQADFIQK KHLDFMSKDI ETFGKMAFAK PDKLNWQYTK PYQYRIVFQK DKITVNDAGN ISQMKADNKV FKKINNLIVS SISGDMFNEK EFAMTFAKSG KSILVKLLPK DKTLLKYVSE IHLYFDVDSV VERVKLIEPS KDYAEILFSN KKLNTKIDEA NFKM
|
| |