Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1617 |
Symbol | glyA |
ID | 8368063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1924942 |
End bp | 1926216 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644984057 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003141723 |
Protein GI | 256820444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGAG ACATTGATAT TTTTGAACTA ATTGAAGACG AAAGAGAGCG CCAAGAGTTG GGAATTGAGC TCATCGCTTC AGAGAATTTT GTGAGTGACC AAGTAATGGA AGCAGCAGGT TCGGTACTGA CTAACAAATA TGCTGAAGGT TATCCAGGCA AGCGTTACTA CGGCGGTTGT GAAGTAATTG ATGAAATCGA GCAAATAGCT ATTAACCGCG CTAAAGTGCT TTTTGGTGCT AAATATGCCA ATGTACAACC TCATAGCGGT TCGCAAGCTA ATGCGGCAGT TTATGCTACT TGTCTTAAAC CAGGTGATAA AATTCTCGGT TTCGACCTCT CACACGGTGG ACACCTTACA CACGGCTCAC CTGTTAATTT TTCAGGTAGA TTGTACGAAC CTGTATTTTA TGGGGTAGAA AAGGAAACAG GAAGACTCAA TTACAACAAT ATATTAGAAA TAGCGGAACG AGAGCGCCCT AAAATGATAG TAGCAGGAGC TTCGGCGTAT TCTCGTGATA TCGATTTTAA ATGCTTTAGG GAAATAGCCG ATAAGGTAGG TGCTATCCTC TTTGCTGATA TTGCACACCC TGCGGGGCTC ATTGCCAAAG GACTTTTGAA CGACCCTATC CCATATTGCC ATATTGTAAC TACTACTACT CATAAAACAC TGCGAGGGCC TCGAGGAGGA CTTATCTTGA TGGGTAAAGA TTTTGAGAAC CCTTTTGATA TAAAGACTCC TAAGGGAGAA GTGCGAATGA TGTCGTCACT TATAGACAGT GCGGTATTCC CAGGTAACCA AGGAGGTCCT TTGGAACATA TCATCGCAGC AAAAGCGGTA GCCTTTGGCG AAGCTCTTTC TGATGATTTT CTCTATTACG CTATACAAGT GCAAAAGAAT GCGCGTAAAT TAGCATCTGT TCTTTTAGCA AAAGGCTATG ATATCATCTC AAAAGGAACT GACAATCACC TAATGCTTAT TGATTTGCGC AATAAAGATG TAAGTGGTAA AGAAGCAGAA GAAGCCCTTG GTAAAGCAGA TATTACTGTG AACAAGAATA TGGTGCCTTT TGATACCCGC TCGCCTTTTG TAACTAGTGG TATTAGGGTA GGAGTATCAG CAATCACTAC TCGTGGACTG AAAGAAGCGG ATATGGAACG CATTGCCGAC TTTATAGACC GTGCGATTAC TAATCGAGAT AATGATGAAG TGCTTGAAGA AATAGCAGAA GAAGTAAATA TGTTTATGGA AGACAGACCT TTGTTTGCAT ATTAG
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Protein sequence | MQRDIDIFEL IEDERERQEL GIELIASENF VSDQVMEAAG SVLTNKYAEG YPGKRYYGGC EVIDEIEQIA INRAKVLFGA KYANVQPHSG SQANAAVYAT CLKPGDKILG FDLSHGGHLT HGSPVNFSGR LYEPVFYGVE KETGRLNYNN ILEIAERERP KMIVAGASAY SRDIDFKCFR EIADKVGAIL FADIAHPAGL IAKGLLNDPI PYCHIVTTTT HKTLRGPRGG LILMGKDFEN PFDIKTPKGE VRMMSSLIDS AVFPGNQGGP LEHIIAAKAV AFGEALSDDF LYYAIQVQKN ARKLASVLLA KGYDIISKGT DNHLMLIDLR NKDVSGKEAE EALGKADITV NKNMVPFDTR SPFVTSGIRV GVSAITTRGL KEADMERIAD FIDRAITNRD NDEVLEEIAE EVNMFMEDRP LFAY
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