| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1572 |
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| Symbol | |
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| ID | 8368016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1874660 |
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| End bp | 1877002 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644984011 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003141678 |
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| Protein GI | 256820399 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0693034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGA TATTCAGTCT TCTGCTACTC AGTTGTGCAT TCTCGCTATA TGCGCAAGAA
ACCTTGCAAC TGCAAATAGA AGACACTCAA AAACTACCCT TAGGCAATGC GGTAGTGCAT
TTCGTTGGAA AGCACTTTAT AAGCGATGCC GATGGGAAGG TAACGATAAA AAAACTCAGC
AAGGGCTCTT ACCCTATCAA AGTAACCTAT TTAGGCTATC ACGATTACGA AAGTACTGTC
ATCATTCCAC ACACACAACC TCTTGTGATT GTAATGAAAG AAGCAGTGAG CGTACTCGAA
GGGACTACCG TATCAGGGCA TACAACTCAA CAGTATGTGA GAGGCTTAAC CCCATCTATC
ATATCCATTT CGCTCAAAAG AAATAGCTTG ATAGACAAAC AAGGCGACGA TTTAGCCAAA
GTGCTCACCT CTATATCGGG GGTATCGATG ATACAAACAG GCGCAACTAT TGCCAAACCG
GTAATTCACG GATTGCACAG CAATCGTATC TTGATACTCA ACAACGAAGT ACGCCAAGAA
GGACAACAAT GGGGTGCCGA CCACGCTCCC GAAATCGACC CTTTGGTAGC CGACCAAATA
ACGGTGGTAA AAGGTGCTGA ATCGGTGCGT TATGGCTCTG ATGCCTTAGG TGGAGTGATT
CTCATAGAAC AAAAAAAACT CCCCTATAGC GACGGTCTGC ACGCCAACTT AGCTTCTTCG
TTTGGCTCTA ACGGACGCAA ATTGAGTACT ACGTTAAAAG TCGAAAGTTC AGTCCCCGAG
TTACCTTCTT GGGCGTGGCG TGTACAAGGA ACTTTGAAGC GTTCAGGCGA CATCAGTACA
GCTAATTACC TGCTGAATAA CACTGCTGCT CGTGAAGCCA ATTTCTCAGT AGCAACAGGC
GTTCAGAAGG AAAAAGGTAC TGCTGAAATA TTTTACAGTA GGTATGAGAA CGAAAGCAGT
GTGTTCTACG GTTCGCATAT TGGGAATTTA GACGATTTGC TCGCTCGGTT CGAAATTGGA
AGACCGCTTA CCACTTATCC ATTTTCGTAT AGCATCAATG CACCCAAGCA AAAAGTAGTG
CACCACTTGC TAAAAGGTAA AGCGTCCTAT TTCTTGCCCT TCGGAGGAAA ACTCACCGCA
CAATACGCTT TTCAGAAAGA TATTCGTCAG GAGTTCAGTG TTCGCCGAAT GGACAGAACC
CGCATCCCAG CCTTAAATAT GGAGCTCACT ACCCACGCAC TCGATGTGTA TTGGGAAAAC
GCTTACAGCA AATGGAAGAG TACCATAGGG GGTAGTTTCA ACAAGCAGGA CAACTACAAC
CAACCCGGTA CGGGGGTAGT ACCTGTAATC CCTAACTATG CCTCTCTTAG TTATGGTGCT
TTTGCAATAC AACGTTTTCA GCGAGATGCT TGGTTATTAG AAGCAGGTGT ACGTTACGAC
TATAAGTACC TCAATGCCGA TGGTTACGAT ATGTACTCAC AGCGTTACGG AGGCGAACAC
AACTTCCATA ATTTCACCTA TACCTTAGGA GGAACAATGC CTATTTCACG AGTTTCACAA
CTGAAATCTA ACATAGGCGT GGCGTGGCGT GCTCCTCAGG TAAACGAACT GTACAGTAGC
GGACTTCATC ACGGCGCAGG TACTTATGAT TTAGGTGACG ATAAGCTCGA ATCAGAAACA
GGAGTGAAGT GGGTTACCTC ACTTTTGCTA AACAATGAGA ATAAACGTTG GAATGTAAAT
CTCGACTTTT ATATCCAATA TATTAAGAAT TACATTTACG ATTATCCTAC CGGCGAAGTG
CAAACCCTCT TTTCAGGCGT GTATCCTATC TTTCAGTACA CCCAAGCCAA TGCGTTTTTT
AGAGGCGCTG ACCTCGATGC TACTGTTCGT TTGTTAAACA AAAACAGAGT AGCACAAGTA
GGCAATCCTA CAAGTTTAGA CTACCATTTG AAAGCCTCAG TAGTATGGGC TAACGAAGTG
AAAACGGGAC GTTACTTTCC GTTTATTCCT GCCCCTCGTT TGAGTCAGTC ACTAGAATAT
AACAAAACGC ACCGCAACAG TTTATTAAGC CGTATGAGTG CTAGCATAGG GCATACTTTT
GTAGCCAAGC AAACACACTT TGAGCCCTCA CAAGAGTTAG TACCTACTAC ACCCGATGCC
TATCACCTTT TCGAGGCGAG CATAGGAGGT ACTTTGGATA TAGGCAAACG CCAAACCCTG
GACATAAGGT TATCAGCCGA AAACCTTTTT AATACTGAAT ATAAGGAATA CACCAATCGT
TTTAGGTATT ATGCCCACGA TTTGGGTAGG AATGTATATT TAAGAATAAA TTACAATTTT
TAA
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| Protein sequence | MQKIFSLLLL SCAFSLYAQE TLQLQIEDTQ KLPLGNAVVH FVGKHFISDA DGKVTIKKLS
KGSYPIKVTY LGYHDYESTV IIPHTQPLVI VMKEAVSVLE GTTVSGHTTQ QYVRGLTPSI
ISISLKRNSL IDKQGDDLAK VLTSISGVSM IQTGATIAKP VIHGLHSNRI LILNNEVRQE
GQQWGADHAP EIDPLVADQI TVVKGAESVR YGSDALGGVI LIEQKKLPYS DGLHANLASS
FGSNGRKLST TLKVESSVPE LPSWAWRVQG TLKRSGDIST ANYLLNNTAA REANFSVATG
VQKEKGTAEI FYSRYENESS VFYGSHIGNL DDLLARFEIG RPLTTYPFSY SINAPKQKVV
HHLLKGKASY FLPFGGKLTA QYAFQKDIRQ EFSVRRMDRT RIPALNMELT THALDVYWEN
AYSKWKSTIG GSFNKQDNYN QPGTGVVPVI PNYASLSYGA FAIQRFQRDA WLLEAGVRYD
YKYLNADGYD MYSQRYGGEH NFHNFTYTLG GTMPISRVSQ LKSNIGVAWR APQVNELYSS
GLHHGAGTYD LGDDKLESET GVKWVTSLLL NNENKRWNVN LDFYIQYIKN YIYDYPTGEV
QTLFSGVYPI FQYTQANAFF RGADLDATVR LLNKNRVAQV GNPTSLDYHL KASVVWANEV
KTGRYFPFIP APRLSQSLEY NKTHRNSLLS RMSASIGHTF VAKQTHFEPS QELVPTTPDA
YHLFEASIGG TLDIGKRQTL DIRLSAENLF NTEYKEYTNR FRYYAHDLGR NVYLRINYNF
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