| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1537 |
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| Symbol | |
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| ID | 8367981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1825236 |
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| End bp | 1826126 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644983976 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003141643 |
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| Protein GI | 256820364 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.14244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG TTCTATACAT AACATTATCC TTACTATCCC TCTCTGCTTT TGCACAAACC
AAAGCCGAAA AAGAGGCTCA AAAAGCAATT GCTAACTCTA AAAAATATAC GTACGAGGGC
AACACCGCTC TCAAAGGCGA TAAACCCGTA CAAGCCGAAG TAGAATATCG CAAGGCAATA
GCCGAAGATA AAAACAACGC TACTGCACAG TATAATCTCG GTACGATGTA TTATCAACAA
AAGAGTTACG ACGAGGCTTT CTCCCGACTC AAAAACGCCT CAACCTCCGA TAAGATAACC
GAAGAAGAAA AACACAAGGC TTTCCACAAT TTAGGCAATG CCTTTATGAA GAACAAAGAG
TACGAAAAGG CGGTGCTCTC TTATAAAGAA GCTTTGCGTC ATAATCCTAA AGATGAAGAA
ACCCGTTACA ATTTGGCAGT AGCCAAAGAA ATGCTTAAAC AAAACCCACC TCCACCTCAA
AACAACAAAA ACAATAAAGA TAAAAACAAC CAACAAAACC AAAACAATCA ACAGAACCAG
CAAAATCAGA ATAATCAGAA TAATCAACAG AACCAAAATA ACCAGAATAA AAACCAAGAT
AACAAGAATA ATCAGGACAA CAAAGACAAT AAAGATAATA AAAAAGATCA AGGCGATAAA
CAGGATAAAA ACAAAGATAA GGGCGACGAC CAAAAAGATC CTAACCAAAA CAACCAGCAG
AATAAAAACC AAAGCGGACA AGGACAAGGT GAGCAACGTC CCTCTTCTCT TTCGCCACAA
CAAATGGAGC GTATCTTGGA GGCAATGAAC AACGAAGAGC GCAAAACTCA AGAGAAAATT
AACGCTCAAA AAGTAAAAGG TCAACGCGCT AAAACTGAAA AAGATTGGTA G
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| Protein sequence | MKNVLYITLS LLSLSAFAQT KAEKEAQKAI ANSKKYTYEG NTALKGDKPV QAEVEYRKAI
AEDKNNATAQ YNLGTMYYQQ KSYDEAFSRL KNASTSDKIT EEEKHKAFHN LGNAFMKNKE
YEKAVLSYKE ALRHNPKDEE TRYNLAVAKE MLKQNPPPPQ NNKNNKDKNN QQNQNNQQNQ
QNQNNQNNQQ NQNNQNKNQD NKNNQDNKDN KDNKKDQGDK QDKNKDKGDD QKDPNQNNQQ
NKNQSGQGQG EQRPSSLSPQ QMERILEAMN NEERKTQEKI NAQKVKGQRA KTEKDW
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