Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1502 |
Symbol | |
ID | 8367940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1785188 |
End bp | 1785994 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644983936 |
Product | outer membrane assembly lipoprotein YfiO |
Protein accession | YP_003141609 |
Protein GI | 256820330 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATAA AAAAATATAT CATCATCGGT CTGCTGACTG TGCTCTTTAC TTCGTGTGGA GAGTATCAAA AAGCCTTGAA ATCAAAAGAA GGAAGCGTAA AATACACTGA GGCTGAAAAG CTATATAAGG CTAAAAAATA TAAAAAAGCG ACACGCCTTT TTGAACAAAT AGCTTCAGAA TATGCGGGTA AGCCACAAGG AGAACGTATT TATTATATGT TTGGAGATTC TTACTATCAG CTAAAACAAT ACAGTTTGGC GTCTTATCAG TTTGAACGAC TTCAGAAATT ATATCCTCGT AGCGAAAAAG CTACAGAGTC GGCTTTCTTA GAAGCGAAAT CGCTTTACTT GGAAACTCCT AAATATAGTG TAGACCAAAC TTATACCTAT CAGGCTCTTG AGAAATTACA ATACTTTTTG GATAGATATT CTGATAGTGA ATATGCTAAA GAAGCTAACG AGCTAGCCTT AGACTTGGTA ACTCGCTTAG AGAAAAAAGA GTTTGAAATA GCTAAACAAT ACGACCAAAT ACGTGACTAT CAAGCAGCGA TGAAATCGTT AGACAATTTT CTGACTAACA ACCCAGGTAG TGCTTTTAGA GAAGATGCGT TATACACGCG CTTACATTCA GCTTACGAGT GGGCTATCAA TAGTATAGAG ACTAAAAAAG AGGAACGCCT CAATACCGCT AAAGAAGCTT ACGACAACTT ATTGCGTGCC TATCCTGAAA CTAAATACAA GAAAGAAGCA GAGAATATGC TTGCTAAAAT AAACACATCA TTAAAAAGTT TTATATCACA AAAATAA
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Protein sequence | MLIKKYIIIG LLTVLFTSCG EYQKALKSKE GSVKYTEAEK LYKAKKYKKA TRLFEQIASE YAGKPQGERI YYMFGDSYYQ LKQYSLASYQ FERLQKLYPR SEKATESAFL EAKSLYLETP KYSVDQTYTY QALEKLQYFL DRYSDSEYAK EANELALDLV TRLEKKEFEI AKQYDQIRDY QAAMKSLDNF LTNNPGSAFR EDALYTRLHS AYEWAINSIE TKKEERLNTA KEAYDNLLRA YPETKYKKEA ENMLAKINTS LKSFISQK
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