Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1404 |
Symbol | |
ID | 8367836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1645888 |
End bp | 1647747 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983832 |
Product | penicillin-binding protein 2 |
Protein accession | YP_003141511 |
Protein GI | 256820232 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.328168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAT ATCTGTTGCC CATTATCATT CTTTTTGTGG CAGTGGTGTT CTTAGTACGG TTATTCTTCT TACAAGTAAT ATTTCACGAG GAAAATACAG GAATTGACAA CATTGCTATT GAAACGGTAT ACGATTACCC CGAACGCGGG TATATTTACG ACCGTAATGG AGAACTATTG GTATCGAACC AACCTGCCTA TGACGTGATG GTTGTGCCCA GTGAGGTGAA AACACTCGAT ACCTTAGAGC TTTGTGGACT CCTTGAAATC AGTAAAGAAG AGTTTAGGGA ACGGCTCATA AAAGCAAGAG ATTACTCACG CAAAAAACCT TCAGTAATCG TGCACCAGCT CTCCAAAGAC GATTATGCTG TACTACAAGA AAAGTTGCGC AAGTTTCAAG GATTTTATAT ACAGAAACGA ATGCTCCGCA GTTACCTCAC CCACAATGCG GGGAATGTAT TGGGATATAT CAGCGAGGTA AATGAATGGG AACTAAAAAA GAACCCTTAT TACTTAGCTG GTGAACTGAT AGGGCGCAGT GGGGTAGAAA AGCAATACGA GGAATTCTTA CGAGGTAAAA AAGGTGTACA ATTCTTCCAA AAGGACAAAC ACAACGCAGC CATTGAGCGC TATAAAAATG GTGCAATGGA TACTTTGCCT ATCACTGGGC AACCCTTGCA ACTAACCATA GACATCAACT TGCAAGCCTA TGGGGAAATG CTGATGCAAC ACAAACACGG CGGAATTGTA GCTATAGAAC CTAAAACAGG TGAGATTCTC GCGTTAATAT CGGCACCTAC TTTTGACCCA GCTCTATTGG TAGGACGTGA ACGCTCTAAG AACTACACAG CCCTTTATAA CGATTCGATT GCTAAACCTC TTTATGACCG CACACTATTA GCAGAATACC CACCAGGTTC GCCATTTAAA GTAATAAACG CACTGATAGG CTTACAGGAA GGTGTGATAA CACCAGGTAG TGTGTTCAGC TGTGGAGGAG GTTATCGTTT TGGAGGGCGT ATAATGCGTT GCCACTGCGG ACGCAGTTCT AATGACCTAT TACACGGGAT AGCTTTTTCT TGTAACTCTT ATTTTGCAAA TACCTATAAG CGTGCTATTG ATATGAAAAC CACTTCGGCA GTGGGTATGG ACAAGTGGAA TGCTCACGTA CGGAGTTTTG GGTTAGGAGG CTTTTTAGGT GCTGACCTAC CGACAGGACG TGCAGGGAAA GTGCCTAATA CTGCTTTGTA TGACAAACAA TATGGTAAAG GTCGGTGGAA TGGTACAACC AATATCTCTA ACGCTATTGG GCAAGGAGAA TTGCTGACCA CTCCTATACA GCTTGCTAAT GTGATGGCAG CTATCGCTAA TAGAGGTTAT TACTATACCC CTCATATCGT AAAAAAAATA GATAATAAAA TTACTCCATT TCAAGAGTAT ACCGTTGCTA AACACACTAC GATAGCCCCT AAGAACTTTG AACCTGTGAT TAGAGGTATG AATATGGCAT ATGAGCAAGG TACCGCACGC CGTACCCAAA TTGAAGGTAT TAATATCGCT GCTAAAACAG GTACCGCCGA AAACTTTATA AAAGTGAATG GCAAGCGTAT GCAACTTACT GACCACTCTA TATTCGTAGC TTTTGCTCCC ATAGAAGACC CTAAGATTGC TATTGCCGTA TTTGTGGAAA ACGGGTATTA CGGAGCACGA GTAGCTGCTC CCATCGCCTC ACTAATGATT GAAAAATACC TAAAAGGGGA AGTATACCGC TGTGACCTCG AAAAGCAAAT GCTCGAAAAG AGTCTTGAAG ACGAATATAT GAAGCCTTAT AGCGGATTGC CTTTTACCAT CAACCGATAA
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Protein sequence | MRKYLLPIII LFVAVVFLVR LFFLQVIFHE ENTGIDNIAI ETVYDYPERG YIYDRNGELL VSNQPAYDVM VVPSEVKTLD TLELCGLLEI SKEEFRERLI KARDYSRKKP SVIVHQLSKD DYAVLQEKLR KFQGFYIQKR MLRSYLTHNA GNVLGYISEV NEWELKKNPY YLAGELIGRS GVEKQYEEFL RGKKGVQFFQ KDKHNAAIER YKNGAMDTLP ITGQPLQLTI DINLQAYGEM LMQHKHGGIV AIEPKTGEIL ALISAPTFDP ALLVGRERSK NYTALYNDSI AKPLYDRTLL AEYPPGSPFK VINALIGLQE GVITPGSVFS CGGGYRFGGR IMRCHCGRSS NDLLHGIAFS CNSYFANTYK RAIDMKTTSA VGMDKWNAHV RSFGLGGFLG ADLPTGRAGK VPNTALYDKQ YGKGRWNGTT NISNAIGQGE LLTTPIQLAN VMAAIANRGY YYTPHIVKKI DNKITPFQEY TVAKHTTIAP KNFEPVIRGM NMAYEQGTAR RTQIEGINIA AKTGTAENFI KVNGKRMQLT DHSIFVAFAP IEDPKIAIAV FVENGYYGAR VAAPIASLMI EKYLKGEVYR CDLEKQMLEK SLEDEYMKPY SGLPFTINR
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