Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1378 |
Symbol | |
ID | 8367809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1617843 |
End bp | 1618445 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644983805 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_003141485 |
Protein GI | 256820206 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAA CTCCAACAAT CAAACGTCCC GTGCCCATAG ACGAAGAAGT GTTGTGGGAT AAAACCACTA CCCTGATGAG TCGTACCAAC AAGCACGGAC ATATAATGGA AACCAATAAG GCATTTCAAG AAGTATCAGG CTATACTGAG GCTGAGTTAT ACGACCAGCC TCATAGCCTT ATCCGCCACC CCGATATGCC CAAAGTAGTT TTCAAAATAC TGTGGGAAAA CCTCAAAGGG CATAATAATT TCCACGCTAT CATCAAGAAC CTCTCTAAAA GCGGGCGCTA TTATTGGGTG ATTACTAATT TTGAAATAGT ACGCAATGAG CAAGATGAGA TTACTGCTTT TGTATCACAC CGCAAAGCTT TGCCTAAAGT ACTCATTAGC GAGCATATAG TCCCTTTGTA CGAACGTCTT TTAAAGATAG AAAAAGCCAA TGGTTTGGAA GTAAGTGAAC GCTATTTCAA CGGCTTTTTA GAAGACCGTA AAACTACCTA CGATGCTTTC ATTCGCCAAT TGCTCAAAGA AAACGCCGAA GAAATCAAAG CCTTCTATAA CAACAAAAAC ACCGATAGCT TTTTAACAGA ACTCATTCGA TGA
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Protein sequence | MTETPTIKRP VPIDEEVLWD KTTTLMSRTN KHGHIMETNK AFQEVSGYTE AELYDQPHSL IRHPDMPKVV FKILWENLKG HNNFHAIIKN LSKSGRYYWV ITNFEIVRNE QDEITAFVSH RKALPKVLIS EHIVPLYERL LKIEKANGLE VSERYFNGFL EDRKTTYDAF IRQLLKENAE EIKAFYNNKN TDSFLTELIR
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