Gene Coch_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1329 
Symbol 
ID8367760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1544350 
End bp1544943 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content45% 
IMG OID644983756 
Productthymidine kinase 
Protein accessionYP_003141436 
Protein GI256820157 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAG AGAATACTGT AAATAACAAC GAAAAGACAG GCTGGATAGA AGTAATATGC 
GGGTCGATGT TCTCAGGCAA AACCGAAGAA CTGATTCGCC GATTACGTCG TGCCCAATTT 
GCAAAACAGA AGGTAGAGAT TTTTAAACCC AGTTTCGACA CGCGTTATGA TGATACCAAC 
ATCGTATCGC ACAACGCCAA TGAAATTCCT TCTACACCCG TAGAAGCCGC CGCCAGCATT 
ATGCTTCTTG CCGATGGTTG CGATGTGGTG GGTATAGACG AAGCACAGTT TTTCGACGAC 
GAGATAGTAC ACGTGTGCAA TGAGCTCGCC AATCGCGGGG TACGTGTAAT CGTAGCAGGA 
CTCGATATGG ACTATAAAGG AAAGCCTTTC GGACCTATGC CCTTCTTGAT GGCTACTGCC 
GAGTATGTTA CTAAGGTACA CGCTGTTTGT ACGCGTACTG GCAACCTCGC TAATTATAGT 
TTTCGCAAAG TGTCTAACGA CCAGCAACGC TTGTTAGGAG AAGCCGATAG CTATGAGCCT 
CTCAGTCGCG CTGCCTTCTA TAAAGCAATG AATGCTAAGA AAACAAAAGA ATAA
 
Protein sequence
MFLENTVNNN EKTGWIEVIC GSMFSGKTEE LIRRLRRAQF AKQKVEIFKP SFDTRYDDTN 
IVSHNANEIP STPVEAAASI MLLADGCDVV GIDEAQFFDD EIVHVCNELA NRGVRVIVAG 
LDMDYKGKPF GPMPFLMATA EYVTKVHAVC TRTGNLANYS FRKVSNDQQR LLGEADSYEP 
LSRAAFYKAM NAKKTKE