Gene Coch_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1322 
Symbol 
ID8367753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1534767 
End bp1535270 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID644983749 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_003141429 
Protein GI256820150 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.473634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC TTCTTCTCTC CGATACCCAT TCGTATATAG ACGATCGTAT ATTGCACTAC 
GCCAGCGAGG CAGACGAAGT GTGGCATTGT GGCGATTTCG GTAACTTGGC AGTGATAGAG 
GCGTTGCAAG CCGTAAAACC TTTGCGTGGG GTTTATGGTA ATATCGATGG CATAGAGATA 
CGGCAGCAGT TCCCTGAAGT AAATCGGTTT GCTTGTGAGG GCGTGGAGGT ACTGATGATA 
CACATAGGCG GTTACCCTAA TAAATACAGT CCGTTGGCAA AACAAGAAAT CCTAACTTGC 
CCTCCTAAAC TCTTCATTTC GGGGCATTCA CATATTCTAA AAGTGCAATA CGATAAACAG 
TTTCAGTTGT TACACCTCAA CCCAGGAGCT GCTGGTCTCT ATGGCTGGCA AACCGTGCGT 
ACGATGCTTC GTTTTGAGAT AGAAGCAGGA GAGATTAAGA ATTTAGAGAT TATAGAGTTA 
GCTCGTAGCA CGACAGGTAA TTAA
 
Protein sequence
MKILLLSDTH SYIDDRILHY ASEADEVWHC GDFGNLAVIE ALQAVKPLRG VYGNIDGIEI 
RQQFPEVNRF ACEGVEVLMI HIGGYPNKYS PLAKQEILTC PPKLFISGHS HILKVQYDKQ 
FQLLHLNPGA AGLYGWQTVR TMLRFEIEAG EIKNLEIIEL ARSTTGN