Gene Coch_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1251 
Symbol 
ID8367681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1458948 
End bp1460039 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content33% 
IMG OID644983681 
Productflavomodulin 
Protein accessionYP_003141361 
Protein GI256820082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TAAAATTTAT ACCAGTAATA GCAATGTTTG CTATATTTAT CTCTTGTGGA 
AAAGACAATG AGAATGGACA AAATAAGGTT GATTTTCCTG AACAACCAGA AAAAACACTA
TCTTTAAAAG CAACGGGAAG AACATCAACA AAGGGGACTG AATATGTTGA AACGGTTCAG
AAACAGCTTG AATTAGACCC TCCTCAATTG ATAAATAATG ATCTAATTAA TTCTATCTAT
CCAGGGAGTG TGCTGGATGG AGGTGATTTT ATGAATGCAG TCTATACTAA TTTAGTAATT
AAAGACCCAA AAGAAATCAC ACTTTCAACC ACTCTAAAAG GTAAGGACTA TATTGTTTCG
GACAAAGCTC TTCCTGTGTT AAGTGATGTA CGTCAGAGAA TTAATGGATT AGTATACACC
AACAGAGGGC AAATAGACTT TAATAACACC TCTTCACTTG TAGATTATAC AGCTGAAGAA
GTAAACACTA AGGAAAGTTT TAATAAAACT TTTTCTGTAC ACGTAAAAGC TAATTTCCTA
AAAGTTGTAA ATGCAGGATT TGGTTATAGC CAAGAACATC TAACTATTCA TAGTAAAAAA
TATGTGTTAG TAAAACTACG CCAAATATTC TATACTGTAA GTGTAGACCC AAAATCAGCA
AATGAATGGG GTAATATCCA AAGTGTAGGA GCTTATGAAC CTGTATATGT AAGCAGTGTA
GATTATGGTC GTGTAGCGCA TTTATTACTT GAAACAGAAG ACGATAAAGA GACTGTAAGA
AAAACTATCT CTGGGTCAAT TGGAGCCAAT ATAGGTAAAT TTGGAGCTGA AATTTCTGCA
GAAAATAAGC AAGAGATGGA GAAATTATTT AACAAAACCA ATATGAAGAT AATGATTTGG
GGAGGAGATT TAGCAAATGC AAAGTTGGTT ACTGACTATA ATAGCTTTAT GGAGTTTTTG
AAAAGACCAG CACCAGAAGA TTTAGTGAAA TCTTGTACAC CTGTAGGTTA TAGAGTTAAA
ACAATAAGAG ATAACAGACC GATTGCCGTA CGCACTATGT ATACTGAAGA ACGATTCACT
TATAAAAAAT AA
 
Protein sequence
MKNLKFIPVI AMFAIFISCG KDNENGQNKV DFPEQPEKTL SLKATGRTST KGTEYVETVQ 
KQLELDPPQL INNDLINSIY PGSVLDGGDF MNAVYTNLVI KDPKEITLST TLKGKDYIVS
DKALPVLSDV RQRINGLVYT NRGQIDFNNT SSLVDYTAEE VNTKESFNKT FSVHVKANFL
KVVNAGFGYS QEHLTIHSKK YVLVKLRQIF YTVSVDPKSA NEWGNIQSVG AYEPVYVSSV
DYGRVAHLLL ETEDDKETVR KTISGSIGAN IGKFGAEISA ENKQEMEKLF NKTNMKIMIW
GGDLANAKLV TDYNSFMEFL KRPAPEDLVK SCTPVGYRVK TIRDNRPIAV RTMYTEERFT
YKK