Gene Coch_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1232 
Symbol 
ID8367661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1439894 
End bp1440811 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content36% 
IMG OID644983662 
Productalpha/beta fold family hydrolase 
Protein accessionYP_003141343 
Protein GI256820064 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TACCTCTATT ATCTTTGATT TGCTTTGGAG TCTTTGCCCA AGAAAGAAAC 
TATGACACCA CACAAGTGAG TATTGATCAG GAAATACAAG GAACACTCTT GTCTCCTAAG
AAGCAGAACA ACACTCCATT AGCTATACTT ATTGCAGGGT CAGGTCCCAC CGACCGCGAT
GGAAATCAAG CACATCTAAA GAATAATTCT TTAAAATATC TCGCCGAAGG TTTAGCAGAA
AAAGAAATAA CTGTTTTCCG TTATGACAAG CGTATCATTG CCCAAATGAA TAAAGGTACT
GTACAAGAGG ATAAGGTCAC CTTTGAAGAT GGAGTAAACG ATGCTCTCTT GGTAGTAAAC
TATTTCAAGG AAAAGTATAA GGATATCATA ATTATAGGAC ACTCTGAGGG AGCTCTAATA
GGACTTCTTA TTGCTCAGAG AACACCTGTC TCTAAGTTGA TTTCTCTTTC AGGAGCGGGC
AGTAATAGTG CTACACTCAT TGAAGAACAA ATAAAGAAGA ATGCCCCTCA GCTCAAAGAG
GAAGCGCAAA AAGTCCTCAA TCTATTAAAA AAAGGAGAGC AAGTAGAGAA TGTTTCTCCT
TATTTGGCTC CTGTATTTAG GAAGAGTGTA CAACCTTATC TTATCTCTTG GTTTAAATAT
AACCCCACTG AGGAGATAGC AAAGATGAAA ATTCCGGTTT TTATTATACA AGGAACTAAT
GATTTACAGG TAGAAAAAAA AGAAGCTCAA CTTCTCAAAG AAGCACAACC TAAGGCACAA
CTCCTCTTTG TGGAAGGAAT GAACCATATA TTAAAAGAGG TAAAAACAAT AGAAGAAAAT
CAGCAATCTT ACTTAAATCC AGATATACCT ATTTCACCTA AACTTATAGA AGCTATTGCT
CAGTTTATCA AAAACTAA
 
Protein sequence
MKLLPLLSLI CFGVFAQERN YDTTQVSIDQ EIQGTLLSPK KQNNTPLAIL IAGSGPTDRD 
GNQAHLKNNS LKYLAEGLAE KEITVFRYDK RIIAQMNKGT VQEDKVTFED GVNDALLVVN
YFKEKYKDII IIGHSEGALI GLLIAQRTPV SKLISLSGAG SNSATLIEEQ IKKNAPQLKE
EAQKVLNLLK KGEQVENVSP YLAPVFRKSV QPYLISWFKY NPTEEIAKMK IPVFIIQGTN
DLQVEKKEAQ LLKEAQPKAQ LLFVEGMNHI LKEVKTIEEN QQSYLNPDIP ISPKLIEAIA
QFIKN