Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1136 |
Symbol | |
ID | 8367558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1354035 |
End bp | 1354691 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644983562 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003141250 |
Protein GI | 256819971 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCG ATAAAAGCAT AGAGGAAATA GCACAGGAAT ACATTCCACA CTTAAAAATC TTAGAAGAAG CAGGTAGTTT TGCTGTTTTT CTGTTAGATA GATTCGGTCG TTACTATTAT GTAACCGAAT ATGTAACCGA AGATATTCAA GCTTCTGATA AACTCAATAT TGAGAAATTG GTGTATCCCG ATGATTTAGA AGTGGTAAGA CGAATTGATA AAAAAGTATG GGAGTTTTTG GACACGCTCC CCGAGGAAGA AAAGCTAACT TACAAATATA TCTATGAAAT GAGAGTCTTG GATAGAGGAA AGTATGTACG AATGATTTAC CAAATGCGCA TATTAGCCTT TAAAGACGAT AATTTTCTCG GAATGGGCAT CATAGACCTC GCTCCTGAAC AATCGGCAAA CACTTCTGTC CGCTTTCAGA TAAAAAACTG CCTTACCGAT GAGATTGTAC CTTTTGCTAT CGAAAGTGCT ACTAATACCC TCCTCACCCC ACGCGAGAGA GAAATACTCG CCCTTGCCAA AGAGGGAATG TTCAGTAAAG AAATCTCCGA AAAATTGAAC ATCAGCGTAC ATACCGTAAA CCGCCACCGC CAAAATATCC TCGAAAAACT ACAAGTAGGT AATATCATTG AAGCAATAAG GTCGTAG
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Protein sequence | MTTDKSIEEI AQEYIPHLKI LEEAGSFAVF LLDRFGRYYY VTEYVTEDIQ ASDKLNIEKL VYPDDLEVVR RIDKKVWEFL DTLPEEEKLT YKYIYEMRVL DRGKYVRMIY QMRILAFKDD NFLGMGIIDL APEQSANTSV RFQIKNCLTD EIVPFAIESA TNTLLTPRER EILALAKEGM FSKEISEKLN ISVHTVNRHR QNILEKLQVG NIIEAIRS
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