Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0978 |
Symbol | |
ID | 8367397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1146735 |
End bp | 1148030 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644983403 |
Product | protein involved in gliding motility GldE |
Protein accession | YP_003141094 |
Protein GI | 256819815 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | [TIGR03520] gliding motility-associated protein GldE |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTTT TAAGCATTGA CGTGGGTATC GTTATTCAAT TTGCAGTGTT TATACTATTA TTATTCTGCT CTGCTCTTAT CTCAGGAGCT GAGGTAGCTC TCTTTTCGCT TACTCCTGCT GAGATTGAAA CACTCAAAGA AGAAAAAACG CCTACCGGCA ATATTATAGC CAAGCTCACA GAGAATCCTA AAAAGCTATT GGCAACGGTA CTTATTGCCA ATAACTTGGT AAACATCTCT ATCGTACTCC TCTTTGTAGA TTTAGGCGAC TTCCTCTTCG GGGGAATTAC AACTCCTTGG GTACGGGCAG TACTCGATGT GGGTGTGGTT ACCTTTGTGC TTTTGCTCTG CGGTGAAATC CTACCTAAAA TCTACGCCAA TCGCAACAAT ATTTTGTTTT CACAGCGCGT AGCTTACTTC ATTTATATCC TCGACTCCTT CTTTACGCCC ATCAGTATGC CGATGAAAAA CTTTACCGTA TGGATACAAA AAAAATTGGG CAAGCAGAAA AGCAATATTT CAGTAGGACA ACTCTCGCAA GCCTTAGAAC TCGCCTCCGA AGAAGATACC ACCAACGAGG AAAAGAAGAT ATTAGAGGGT ATTGTTTCTT TTGGCAATAC CGAAACCCGC GAAGTAATGG TACCCCGTGT AGATATCTTT GCTCTCAGCG AAGAGCTCTC ATATCAGGAG TTGCTAAACG AAATCGTGGC GATAGGCTAT TCGCGCATTC CCGTATACCA CGAGAATTTA GACCATATTA CAGGGGTAAT TTACATCAAA GACCTCTTGC CACATTTAGA CAAAACTGAT TTCGACTGGA ATAGTGTGAA ACGCAATGCT TTCTTCGTTC CCGAAAACAA GAAATTAGAC GATTTGTTGA GCGAGTTTCA AGAGAAGAAG ATACACCTCG CTGTTGTAGT AGATGAGTAC GGTGGTACTT GTGGAGTGAT TACCTTAGAG GATATCATAG AAGAGATTGT GGGAAATATC AACGATGAGT TTGACGATGA AGATGTAACA CACTTCAAAA TCAATGATAA TGTCTTTATT TTTGAAGGAA AAACGGTATT GAAGGACTTC TATCGCATTC TTGAATTTAC TGATGAAGAA GAGGCTCTAT TTGACGAGAA TCGCGGTGAT GCCGAAACGC TTGCAGGCTT TCTCTTAGAG ATTTCGGGCA ACTTTCCTCA GAAAGGAACT CCTATTCTCT TTGGCAACTA TAAATTCATT GTAGAAGCTT TTGACAAGAA ACGTATCAAG CAAATCAAAA TCATTAGAAC GAATAATCCC CAATAA
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Protein sequence | MPFLSIDVGI VIQFAVFILL LFCSALISGA EVALFSLTPA EIETLKEEKT PTGNIIAKLT ENPKKLLATV LIANNLVNIS IVLLFVDLGD FLFGGITTPW VRAVLDVGVV TFVLLLCGEI LPKIYANRNN ILFSQRVAYF IYILDSFFTP ISMPMKNFTV WIQKKLGKQK SNISVGQLSQ ALELASEEDT TNEEKKILEG IVSFGNTETR EVMVPRVDIF ALSEELSYQE LLNEIVAIGY SRIPVYHENL DHITGVIYIK DLLPHLDKTD FDWNSVKRNA FFVPENKKLD DLLSEFQEKK IHLAVVVDEY GGTCGVITLE DIIEEIVGNI NDEFDDEDVT HFKINDNVFI FEGKTVLKDF YRILEFTDEE EALFDENRGD AETLAGFLLE ISGNFPQKGT PILFGNYKFI VEAFDKKRIK QIKIIRTNNP Q
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