Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0968 |
Symbol | |
ID | 8367387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1130554 |
End bp | 1133865 |
Gene Length | 3312 bp |
Protein Length | 1103 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644983393 |
Product | conserved hypothetical protein, membrane |
Protein accession | YP_003141084 |
Protein GI | 256819805 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.688922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA ATCAATTTAA GAAATATAAC CTCATTGTGG GGTGGGCTGT TTTTGCCGTA GCTCTTATCA CTTATGGGCT TACGGTAGAA CCTACGGTTA GCTTTTGGGA TTGTGGCGAG TATATTGCTA CCTCAGCGAA ATTGGAAGTG GGTCACCCTC CCGGAGCGCC TTTATTCCAA ATGATGGGCG CTTTTATAGC TGCTTTTGCT CCGAACTCGG ATAAGATTGC GCTGTTTGTG AATTATATGT CGGTTTTATC GAGTGCTTTT ACGGTTCTTT TCTTGTACTT CATCATTGTA AATTTGACCA AGAAAATCGC TTTAAAGAGA ACCGATTCTG TTGAAGAAAA AACGCCTGCT ACGCTTACCC AAGGGCAGTT TATCGCTGTT TTGGGGAGTG GGGTTGTAGG GGCTCTTGCC TATACTTTCT CGGATAGTTT TTGGTTTAAC GCGGTGGAAG CAGAAGTGTA TGCAATGGCA ATGCTATTTA TGTCGGCTAT GTTTTGGGTA GGCATCAAGT GGACGGACAG TTTGCACGAA CCACGTGGCG ACCGCTGGTT GTTACTGATT TCGTTAGTAG TGGGGCTGTC GTTTGGGGTG CACTTTATGG CGTTACTGAC CATTCCTGCC ATTGGTATGC TTTATTTCTT CAAGAGTAAC TACAAGAAAA CGGTAGTGAA CTTCATCATT GCTAATGTAG TTTCTATCGC TATTTTGCTG TTGATATTTA AACTAATATT ACCTTACACG TTGGCGTACT TTGGTTATTT GGAAGTATTT TTTGTGAATA GCTTCGGTAT GCCGTTCAAC TCAGGGACTA TTATCGCGGG ACTCTCGGTT ATTGCGTTCT TCTATTTTAC GCTGAACTAC GCTTATAAGC AAAACAAAGT GCGCTTGCAA ACGGGCTTTT TATGCTTGTT GTTTGTGTTT ATAGGGTTTT CGTCTTGGCT AATGATACCT ATTCGCGCGA ATGCTGATAC GGTTATCAAT GAGAACAGTC CGACTGATGC GCGTTTGCTA TTAGCTTATT ACAACCTTGA ACAATACCCC GAAACGCATT TGTTCTACGG TCCTATGTAT TCGGATAAAT ACGCTGGATT AGACGAAGAG AACCCGTATG AAGATGCGAA GCCAAAATAC GAGCGCGATT ATGCCTTAGG CAAATACATC ATCGTGAATC AGTACAAAAA CGCTCAGATG GCGTCGAATA GCAAACAAGA GGGTGTTTTG CCAAGAATGT GGAGTGCGCA ACACGCGGCG AATTATATGA AGCTCACAGG ACTACTTACG TTTAGAATAA AAGAAGAAGC TTATAACGAG CCGAAGCTCT ATCAGTTCTT ACAAGAAGTG CAAAGGCAAA TGCAAATACA ACCGCTTCCG CCTGAGCGTT ACGACCAATT CCTTACCGAA TATCGGGACT ATATAGAAGT AGAGAAGCCA AGTTTTTGGA AGAATATGCA CTACTTGTTC GAGTATCAGT TTGGGTATAT GTACTTCCGC TATTTTGCTT GGAACTTCAT AGGCAGGCAA GACGATGTGC AAGGCAAGAT GGAGAATGAC CACGGCAACT GGCTATCGGG CATTAAGCCT ATTGATAGTT TGCGCCTTGG GTCGCAAGAC AACCTTCCTG CCGATGTGCT GAACAATAAA GCTCGTAATA CTTACTATTT CCTGCCTCTG CTCTTAGGAC TCTTAGGGTT ATTTTTTATG GCGACGAAGA GCGAACGCCA AACGTGGGTA GTGATGATGC TTTTCCTCTT TACGGGTTTG GCAATGAAAA TATACCTCAA CGAACGACCG TTTGAACCGC GAGAGCGAGA TTATCCGTTA GTAGGTTCGT TCTACGCTTT TGCTATATGG ATAGGAGTGG GTGTATATGC GTTATTCCAC GCACTTAGGA GGGTGCTTTC GTCACGAATA GGAGCGCCTT TGGCAGTGGT AGCGAGTTTG CTTGCTGTAC CTGTGCTGAT GGCAAGTGAG AATTGGGACG ACCACAACCG CTCGCAAAAG TATTCGGCAG AGTTTATTGC GGACGCTTAT TTGAGCTCGG TAGTTAAAGA TAAAGACGCT ATGATATTCA CCATTGGCGA TAACGATACG TTCTTACTGT GGTATGCCCA AGAAATAGAA GGCTATCGCA CCGATGTGCG GATAATTAAT ACGAGCTTGT TGCAAACGGA TTGGTATATA GACCAAATGA AGCGCCAAGC GTACCAAAGT AGTCCTATCC CAGGTGAAAT GGTGCACAAA CAATATGCTC ACGGGGTACG TGAAGGAGTG TATTTCCAAA AACGCACCGA GAACCGCTGG AACATTAAAG ACTTTGTGAA ATGGGTAACC AGCGATGACC CTAATACACA GCTCAGTAGC AGTAGTAGTG AAAGTAGAAC CTTTAACTAC TACCCTACGA ACAAAATACG GATTCCTGTA AATAAAGAAA ACGTACTAAA GAGCGGTATT GTAAAACCCG AAGATGCTGA TAAAATAGTA GACTATATAG ATATCACGCT CCCTAGTGCT ATCGATAAAG CACGTATTGT GATGCTGGAT ATTTTGGCTT ATAACGATTG GAAACGCCCG ATATACTTCT CAGGAGGTAG TATGGACTCT GCTGAGTATA TCTGGATGAA GGAGTACTTG CAATTAGATG GACTGGTGTA CAAACTTGTG CCTATTAAAA CAGAAATCGA TAAGAACCAC CCCTTTGATA TGGGTCGTAT AGACAGTAAT TTGATGTACG ACATCATAAA GAAATGGGAT TGGGGTAATA TGGGTAAAGC AGGTATTTAC TTAGACCCCG AAACGCGTAA GAACAGTATT ATCTTCCGCG GTAATTTGGC ACGTCTTACC GAAAAACTGA TAGAAGAAGG TAAATTAAAT AAAGCCAAAG ATATCTTGGA TATCGGAATG AAGCATATGC CTTTGGAGGC TTATGGCTAT TACTTCACTC TTGACCCTTT TGTACAAGGT TATTTTAGGG TAGGTGAGAA AGAAACCGCT CGTAAATTGG CTTTGCAGAT ATTTGGGAAA TATCAAGAAG AACTGAATTA TTACGCACAC TTATCGCCAG ATGAGCGATA CGCTAATACT GCCAGAATAC AGTATACCAT AGACCGCTAT GGAGAATTAT TATTGCTCAT AGCGCCTTTG GATAAGGATT TTTACGAAAG ACAAGTAGAA GTGCTCAGAG CGAAGGCGAG TCCGTTTATG AAATCGCAAG AGCTTGATGA GTATATGAAG ATGCTAATGG ATGAGGAGGC GGATACGCTT GTTCAGGCAG GAGCGGAGAA AGATAGTGGA AAGAGCGAAT AA
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Protein sequence | MTDNQFKKYN LIVGWAVFAV ALITYGLTVE PTVSFWDCGE YIATSAKLEV GHPPGAPLFQ MMGAFIAAFA PNSDKIALFV NYMSVLSSAF TVLFLYFIIV NLTKKIALKR TDSVEEKTPA TLTQGQFIAV LGSGVVGALA YTFSDSFWFN AVEAEVYAMA MLFMSAMFWV GIKWTDSLHE PRGDRWLLLI SLVVGLSFGV HFMALLTIPA IGMLYFFKSN YKKTVVNFII ANVVSIAILL LIFKLILPYT LAYFGYLEVF FVNSFGMPFN SGTIIAGLSV IAFFYFTLNY AYKQNKVRLQ TGFLCLLFVF IGFSSWLMIP IRANADTVIN ENSPTDARLL LAYYNLEQYP ETHLFYGPMY SDKYAGLDEE NPYEDAKPKY ERDYALGKYI IVNQYKNAQM ASNSKQEGVL PRMWSAQHAA NYMKLTGLLT FRIKEEAYNE PKLYQFLQEV QRQMQIQPLP PERYDQFLTE YRDYIEVEKP SFWKNMHYLF EYQFGYMYFR YFAWNFIGRQ DDVQGKMEND HGNWLSGIKP IDSLRLGSQD NLPADVLNNK ARNTYYFLPL LLGLLGLFFM ATKSERQTWV VMMLFLFTGL AMKIYLNERP FEPRERDYPL VGSFYAFAIW IGVGVYALFH ALRRVLSSRI GAPLAVVASL LAVPVLMASE NWDDHNRSQK YSAEFIADAY LSSVVKDKDA MIFTIGDNDT FLLWYAQEIE GYRTDVRIIN TSLLQTDWYI DQMKRQAYQS SPIPGEMVHK QYAHGVREGV YFQKRTENRW NIKDFVKWVT SDDPNTQLSS SSSESRTFNY YPTNKIRIPV NKENVLKSGI VKPEDADKIV DYIDITLPSA IDKARIVMLD ILAYNDWKRP IYFSGGSMDS AEYIWMKEYL QLDGLVYKLV PIKTEIDKNH PFDMGRIDSN LMYDIIKKWD WGNMGKAGIY LDPETRKNSI IFRGNLARLT EKLIEEGKLN KAKDILDIGM KHMPLEAYGY YFTLDPFVQG YFRVGEKETA RKLALQIFGK YQEELNYYAH LSPDERYANT ARIQYTIDRY GELLLLIAPL DKDFYERQVE VLRAKASPFM KSQELDEYMK MLMDEEADTL VQAGAEKDSG KSE
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