| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0932 |
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| Symbol | |
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| ID | 8367351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1084463 |
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| End bp | 1087501 |
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| Gene Length | 3039 bp |
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| Protein Length | 1012 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983357 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141048 |
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| Protein GI | 256819769 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.112276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAA AACAAAGAAC TTTATTAAAC AGTATTGGCA AGCTCGCCTT GCTACTACTT
TTTAGCTTGC TTTCTACCGC CCTTTCTGCC CAAAACAAAA AGATTAGCGG AAAGGTAATC
GATGAAAAAC ACCAGCCCGT ACTGGGGGCA TCGGTGGTGG TGAAAGGCAC TACTAAGGGT
ACTACTACCG ATTTCGATGG GAATTTCACG ATAGATGTAC CTGCTAAAGC CACGCTATCG
GTCTCATTTA TAGGGTATCA CACCCAAAAT GTAGCGGTAG GCAACCAAAA CCAACTCACT
ATCGTGCTCA AAGAAGAACA AGAGCAGTTA GACGAAGTGG TGGTGGTAGG CTATGGTACC
GTCCGCAAGA AAGACCTTAC GGGGGCTGTC TCTTCGGTGT CTAACAAAGC CCTCAAGGAG
AAACCTATTG CCAACGCAGG GGAAGCGCTT CAAGGGCGTG CTGCTGGGGT GCAAGTAACC
TCGGCGGGAA AACCTGGCGA CAACGTGTCA TTTCGCATTC GCGGTATTAG CACGATTAAC
AATAGCGAAC CGCTACTGGT TATCGATGGT GTACCTACCG ACCTCGGTAT CAACGCGCTC
AACGTAGATG ATATAGAAAA TATCGATGTG CTAAAAGATG CTTCGGCAAC AGCGATTTAC
GGTTCTCGCG GTGCCAATGG GGTGGTGCTC ATCACTACCA AAAAAGGAAA AAATGGCGAC
GGCAAACTGT CGTTTAGCAC CAATGTAGCT CTTCAACAAG CTACCAACTT ACCCGTGATG
CTCAATGCCC GTGAGTTTGC TTCTTTTCAC AACGAAATGA TTGCCAACTA CAACCGCACC
CCTGGGGTGA GTCCGCTTAC ACAACGTCCT GATTTCGCCA ATCCTGAAGA CTGGGGGGAA
GGCACCAACT GGCTCAAAGC GCTTTTCCGT CCTGCTTTTA TGCGTAATTA TTCGCTTTCT
TATTCAGGCG GTAACGACAA AAGCAATTAT TACGTATCAG CTGGGGTGTT CGACCAAGAT
GGGATTATCC TCAACACTTC TTACCGCCGT TATACAGTGC AGTTCAATGG TGAATCGCGC
GTAAAACCGT GGATTAAGTT TGGCAACAAC CTCACTCTCA GCCACGACGA AAAGAAATCG
GGCGACTACA ACATCCGTAT GGCAATGGCT TCTTTGCCTA CACAGCCTAT TTACAATGAA
GACGGTAGCT ACTCAGGTCC TGATTCGCCT GCCCATCAGT ACAGCGATAT CCGCAACGTG
GTCGGTACCG CTCTTATCAA CGGACAAAAC ACTACCAAAG GCTATAACAT TTTGGGGAAT
ATTTTTGCCG AGATTACCCC TGTGAAACAT TTAGTATTCA AAACTACTGG AGGTCTTGAT
TTTAAATATT GGGACAATCG TAGTTTCTCC CCTAAATACA ACTGGAAACC TATACCCAAT
CCGCTCTCTA ACCTCTACCA AGATGCTAAC AAGAGTACTA CCCTCCTCTG GGATAACACA
CTCACCTACA CCAATACCTT TGCTCAAAAG CACTTCCTCA ATGTGATGGT GGGTACGAGT
GCGCAAAACA ACGTGTATAG CAAAATCAAT GCGAGTGTGA GCAATTTCTT GAGCGACCAG
CAAAACCAAC TCAGCAAGGG ATTAGAAAAC CCTACGGTAG GCGGCACAAT GAACGATTGG
GCTATCCTCT CTTTCATCGG GCGACTCAAC TATACGTATG CTGATAAGTA CTTGCTCACT
GCTACAGTGC GTCGCGATGG TTCTTCGCGT TTCTCCAAAG AAAATCGTTG GGGTACTTTC
CCTTCTTTCT CTTTGGCGTG GCGTCCATCA AATGAGTCTT TCTTCCCTAA AAACGACTAT
GTAAACGATG TGAAATTGCG CGTGGGTTAC GGTATGACGG GTAACCAAGG CGGTATCGAC
AACTATGCTT ATTTCACCAA ATTGCGCACA GGGCAATATG TGTTCAACAA CAACCTCGTT
TCTACCCTTT ATCCTCACGT GATGCCTAAC CCTAATGTGA AATGGGAAAC CGTAGAGCAA
TTCAACGGGG GTATTGACCT CGCGCTACTC AAAAACCGCT TGAACCTCAC TTTCGATGCT
TATATCAAAA ACACCAGCGA TATGTTAGTG CCAATGGCAG TATCGGTAAG TTCTGGTTAT
TCGGATATCA ATGTGCCGAG TATCAATGCT GGTAAAGTGG AAAACAAAGG AGTAGAGCTT
ACTGTATCAT CAGTGAATGT GAATAAAAAG GACTTCCAAT GGAATACTGA TGTAAATGTA
TCGTTCAACC GTAATAAAAT CGTGAAAATG AACGACGGTG TGCCTTTGTT TACTGGTTTT
GAGGCGTTCC TCACCAAATT GCAAATCCTC TCCGAGGGTC ACCCTGTGAA CTCCTTCTAT
GGCTATGTAA TGAACGGACT TTTCCAAAAC CAAACAGAGG TAGACAACTA TGCTACTCAA
GTGGAAAATG GTACTGCCCC TGGTGATGTG AAGTTCCGAG ACCTCAACAA CGATGGGGTT
ATCAATGCTG AAGACCGTAC CTATATCGGT AATCCGTTCC CTGAATGGAC GTTCTCTATG
AACAACAATT TCAACTACAA GAATATTGAT TTACAAATAT TTTTACAAGG TGTAGCAGGC
AATGATATCT ACAATGCCAA TCGTATATGG CAAGAGGGTA TGTCGGTGCC ACAAAACCAA
ATTGCTAAGG TAAAAGATCG CTGGACAGGC GAAGGTACTA GCAACAGCAT TCCGCGTGCT
ATCTATGGCG ACCCTAACCA AAATGCCCGT CACTCAACCC GCTTTGTAGA AGATGGTTCG
TATTTGCGCA TCAAAAATGT AACCTTGGGG TATACACTTC CTAAAGAGGT TACTCAAAAA
TTCCACACCG ATATGTTGCG CATATATCTG TCTTGCCAAA ACCTCTATAC TTTCACCAAA
TACAGCGGTA TGGATCCCGA AGTAGGTACT GGTGGCGTTG ATAGCGGTAC TTATCCTGTA
ACTCGCACAG TTAGCTTTGG ATTAAACGTG CAGTTTTAG
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| Protein sequence | MKGKQRTLLN SIGKLALLLL FSLLSTALSA QNKKISGKVI DEKHQPVLGA SVVVKGTTKG
TTTDFDGNFT IDVPAKATLS VSFIGYHTQN VAVGNQNQLT IVLKEEQEQL DEVVVVGYGT
VRKKDLTGAV SSVSNKALKE KPIANAGEAL QGRAAGVQVT SAGKPGDNVS FRIRGISTIN
NSEPLLVIDG VPTDLGINAL NVDDIENIDV LKDASATAIY GSRGANGVVL ITTKKGKNGD
GKLSFSTNVA LQQATNLPVM LNAREFASFH NEMIANYNRT PGVSPLTQRP DFANPEDWGE
GTNWLKALFR PAFMRNYSLS YSGGNDKSNY YVSAGVFDQD GIILNTSYRR YTVQFNGESR
VKPWIKFGNN LTLSHDEKKS GDYNIRMAMA SLPTQPIYNE DGSYSGPDSP AHQYSDIRNV
VGTALINGQN TTKGYNILGN IFAEITPVKH LVFKTTGGLD FKYWDNRSFS PKYNWKPIPN
PLSNLYQDAN KSTTLLWDNT LTYTNTFAQK HFLNVMVGTS AQNNVYSKIN ASVSNFLSDQ
QNQLSKGLEN PTVGGTMNDW AILSFIGRLN YTYADKYLLT ATVRRDGSSR FSKENRWGTF
PSFSLAWRPS NESFFPKNDY VNDVKLRVGY GMTGNQGGID NYAYFTKLRT GQYVFNNNLV
STLYPHVMPN PNVKWETVEQ FNGGIDLALL KNRLNLTFDA YIKNTSDMLV PMAVSVSSGY
SDINVPSINA GKVENKGVEL TVSSVNVNKK DFQWNTDVNV SFNRNKIVKM NDGVPLFTGF
EAFLTKLQIL SEGHPVNSFY GYVMNGLFQN QTEVDNYATQ VENGTAPGDV KFRDLNNDGV
INAEDRTYIG NPFPEWTFSM NNNFNYKNID LQIFLQGVAG NDIYNANRIW QEGMSVPQNQ
IAKVKDRWTG EGTSNSIPRA IYGDPNQNAR HSTRFVEDGS YLRIKNVTLG YTLPKEVTQK
FHTDMLRIYL SCQNLYTFTK YSGMDPEVGT GGVDSGTYPV TRTVSFGLNV QF
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