| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0785 |
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| Symbol | |
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| ID | 8367203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 947051 |
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| End bp | 948586 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983212 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003140903 |
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| Protein GI | 256819624 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TTTATAAAAT AATAATTTTA GTAGTAGCTC CTCTGTTCTT TACCGGCTGT
TTCAACCTCG ACCAACAACC TTATGAAGAT TTGAGCCAAG CTAACTCTTT TAAAACCGTA
CAAGATGCTC AATTTTGGGT GAATGGTATG TATGGTAAGT TGCGTACAAA CATATACGGA
AGTGCTATGT ATGCTACCGA CTTGCAAGCT GATTTCCTGA ATATGGCCTT AAGAGACGGT
ACTAACGAAA CGATTACAAA CTTTCAAAAC TGGACGTTGT TTACTGTCAA TAATGCAGCT
ACAGCAACTA TTTGGCAACG CTATTTTGGG GCAATACAAA ATATAAATAT AGGTTTAGAG
GGGATTCCTA CTATTACTAT TCCCCAAGAA AATTACCGCA CCGATTCGGC ACAAATAAAG
CACAATATGG GCGAATTGTA TTTGGCACGT GCTTATTACT ACACCTATCT GCTTACGCAT
TATTGCCCTA CCGACGAGGC TTCTGCTTAT GGATTGCCTT TGTTAAGCGG GCCTACTATC
AACAATTTTC CTAACAGAAG TACAGTAGGA CAGACTTACG ACTTTATTTT GGCCGATATA
GCACAAGCCG AAACTCGCCT TAGTGATGTA ACAGGTGCTT TAGGGTCAGA GAAGTTTACC
AAAGATGCAG TTGCAGCACT CAAGGCACGT GTATTGCTTT ATAGAGGCAA GTGGGCAGAG
GCTTATGCCA CAGCTACTTC AATTATAGGT AGTCGTTATA GCTTAGTGAG TAGTAGTAGT
GATTTAGAAA AGGTATGGAA AGATGATGAT ACTGCAGAAA GTATTGTACA GCTTTATGCT
AAATACGATG TAGGTAATAC AGCAGAGTTA CCATCAGCCA ATGATATTTA TTTGGGCTAC
CAAAGAGAGT GGAACAATAG ATTGCGTAGG TATGAAATAA GGTATTTGCC AAAAGCAATA
CCTACTCAAG ATTTCGTAGA TTTGTATAAT AACAGCGATT ATCGTAAGTC TATTTACATC
AAAAAACTTT TTGCTAATTA TGGTAGTGCT ACTTTCACCG ATTTGTATTT GGTAAATAAA
TACCCTGACA ATCCTCTTCT AAAACAAACA TCAGGTATCT CCCCTACTTA TATGCATCGT
CCTAAGGTAT TTCGTATTGC TGAGATATAC TTAATAGCAG CCGAAGCCGC TTATAAAAAC
GGCGATCAAA CTAATGCTAA AACCTACTTA GACAGATTGC GCACCGCTCG TGGTATTGGT
AGTGTAACCT ATACCGACCT TTGGGCAGAG ATTCAAAACG AACGCAACCG CGAACTCGCT
TTTGAGGGCT TCCGTATGGC AGATATCAAG CGTTGGAATT TGGGCGTAGT ACGTGGTACC
CCTCAGAACC TCAGTGCTAT TGTATCAGAT CCTGCTGACC AGTATTATCA GCTTAATATC
CCTGCAGGGA ATTATAAAAT GGTTTGGCCT CTTTCTCCAA GTGATATTCT CTATGAACAA
GGTAGAGCCA ACTGGCAACA AAACCCAGGT TGGTAA
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| Protein sequence | MKKIYKIIIL VVAPLFFTGC FNLDQQPYED LSQANSFKTV QDAQFWVNGM YGKLRTNIYG
SAMYATDLQA DFLNMALRDG TNETITNFQN WTLFTVNNAA TATIWQRYFG AIQNINIGLE
GIPTITIPQE NYRTDSAQIK HNMGELYLAR AYYYTYLLTH YCPTDEASAY GLPLLSGPTI
NNFPNRSTVG QTYDFILADI AQAETRLSDV TGALGSEKFT KDAVAALKAR VLLYRGKWAE
AYATATSIIG SRYSLVSSSS DLEKVWKDDD TAESIVQLYA KYDVGNTAEL PSANDIYLGY
QREWNNRLRR YEIRYLPKAI PTQDFVDLYN NSDYRKSIYI KKLFANYGSA TFTDLYLVNK
YPDNPLLKQT SGISPTYMHR PKVFRIAEIY LIAAEAAYKN GDQTNAKTYL DRLRTARGIG
SVTYTDLWAE IQNERNRELA FEGFRMADIK RWNLGVVRGT PQNLSAIVSD PADQYYQLNI
PAGNYKMVWP LSPSDILYEQ GRANWQQNPG W
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