| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0657 |
|---|
| Symbol | |
|---|
| ID | 8367074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 809388 |
|---|
| End bp | 810350 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644983084 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003140776 |
|---|
| Protein GI | 256819497 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.488554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAT TAAAAGCTGG CGTCCTCGGT GCAGGACATT TAGGAAAGAT ACATTTGCGA
TTGCTCAACC AATCCGAAAA ATACGAACTC GTAGGCTTCT ACGACCCCGA TGAAGCAAAC
GCTAAAAAAG TAAGCGAAGA GTTTGGCTAT AAGCGTTTCG ATAGTATAGA AGCACTCATC
GCCGAATGTG ATATGGTAGA CGTAGTAACC CCTACCCTCA ACCATTTTAT GTGTGCCGAA
AAGATTATCA AAGCAGGCAA ACACCTCTTT ATCGAAAAAC CTATCGCTAC TACGGTAGAA
GAGGCAGAAG CTATGATTGC TCTTGCCAAA GAACACCACG TGAAAGGACA AGTAGGACAC
GTAGAGCGCT TCAATCCGGC TTTTATTGCC GTACGCGACC AAATTCACAA CCCTATGTTC
ATCGAGGCAC ACCGCTTAGC TGAGTTCAAC CCTCGTGGTA CCGATGTGCC CGTAGTGCTC
GACCTAATGA TTCACGATAT CGATGTAATC CTAAGCGTCG TAAAATCTAA GGTGAAACAC
ATTTCGGCAA GTAGTGCAAT GGTCATCAGT CATTCCCCCG ATATTACTAA TGCCCGCTTA
GAGTTTGAGA ACGGTTGTGT AGCCAATATC ACTGCCAGCC GTATCTCTAT GAAGAATATG
CGCAAAAGCC GTTTCTTCCA GAAAGACGCT TATATATCCG TAGATTTTTT GGAGAAAAAA
GTAGAGGTAG TGAAGATGAA AGACGCCCCA GAAGTACCAG GAGACTTCGA TATGATACTC
CAAAATGCAG AAGGAGAGCG CCGTCAAATC TATTTCGAAT ACCCTGAAAT ACATAATAAC
AACGCTATCT TAGACGAGCT CGAAAGCTTT GCCAATGCCA TTGTAAACGA TACGACCCCT
ATGGTCACTC TCGAACAAGG CACCGAAGCC CTCCGGATTG CCAAGAAAAT AGTAAGTTTA
TGA
|
|---|
| Protein sequence | MTKLKAGVLG AGHLGKIHLR LLNQSEKYEL VGFYDPDEAN AKKVSEEFGY KRFDSIEALI
AECDMVDVVT PTLNHFMCAE KIIKAGKHLF IEKPIATTVE EAEAMIALAK EHHVKGQVGH
VERFNPAFIA VRDQIHNPMF IEAHRLAEFN PRGTDVPVVL DLMIHDIDVI LSVVKSKVKH
ISASSAMVIS HSPDITNARL EFENGCVANI TASRISMKNM RKSRFFQKDA YISVDFLEKK
VEVVKMKDAP EVPGDFDMIL QNAEGERRQI YFEYPEIHNN NAILDELESF ANAIVNDTTP
MVTLEQGTEA LRIAKKIVSL
|
|---|
| |