| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0537 |
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| Symbol | |
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| ID | 8366949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 670741 |
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| End bp | 673815 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644982960 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003140657 |
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| Protein GI | 256819378 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTAA ACAAAGTATC TTTCGCACTA TTTTTAATAC TAATAGTGCA AGGCTTCTCG
TGGGCGCAGG AACGAGAAGT GACAGGAACA GTACGCGATG CTAGTGGAAC CGAAATGATG
GGCGTAGCTG TAGTAGTAAA AGGAGAACAA CACGGTGTTC AAACCGACTT TAATGGTCGT
TATAGCATCA AGGTTGCTCC AGGTAAGACC TTGGAGTTCT CATTCTTAGG AATGAAAACC
CAAAATCACA AAGTAGGTCC TTCAGGTCGC ATTGATGTAG TAATGCAAGA AGAAGCCCAA
GTGATTGATG AGGTAGTAGT TTTGGGTGTT GTTAAAAAGA AAGCAGCCGA ATCCACAGGG
AATACTGTAC AGTTATCAAG TAAAGATATA AGTACACCTT CGGCTATTTC TGTAGACCAA
GCTCTGCAAG GGAAAACTCC AGGAGTGGTA ATTAACGCTG CTTCAGGAAC ACCAGGAGCA
GAACAGACCG TGATGATTCG CGGGGTAGGC TCTATGAATA GTAGCAATAA ACCTCTTTAT
GTGATAGATG GTGTGCCAGT AATCACAGAA AACTTAACAG AGGATAAAAA TACAGCTTCT
TCAATGTCAA CCCTTGCAAG TATTAATAAT GAAGATATAG AAACCCTAAC AGTGCTCAAA
GATGCCGCCG CTACGGCTCT TTATGGAGCG AGAGGCTCCA ATGGGGTTAT TGTTATTACA
ACCAAGTCTG GTAAAAGAGG AAAAACGAGG TTTAATGTAA ACACCTCAGT GGGTTTCCAA
AACGATGCAT ATTATAAAAG GTCTCCTCTT ACGGGTGACC AACGCTATCA TTTGTTAAAG
CAAGGTTTAG CAAACCAGTT TGCAAGTAGA GGTGTAACTT ACGACACCGC AATTGATTTT
GCCCAGACCA ATGGTTTGAG AATCAACGGG GCAGAAAACT TTAATAGTGC ATTAAATAAT
AACAATTGGT CAGAACTTAT AAAAAACAAA AATGCTGTAA TGACCTCTGC CGATATATCA
GCCTCTGGAG GAGATGAAAA AGGAACTTAT TATGTATCGT TGGGATATAA CAGAACAGAA
TCTACTGTAA AAACATCCGA CCCTTTTAAA CGTGTATCTG GATTGATAAG AATTAACAGA
GATTTGAATG ATAAATTGAA GTTAGAGGCT TCAGTAAATG GCTCTTGGGT ATCTCAAAAT
CCTATTGCTG AGCAATCAGC TTATTTTACA AATCCTTATG TGACAAAAAT ATTGATGTCT
CCTTGGGTAA GTCCTTATAA TGCTGATGGG TCCTATAATG TTACCACATT TAATGACTAC
ACAAGTTTGT ATAATTATTT GTATATAAAA GACCACGATA TATCAAAGAA CAATACCCTA
AGAGGGTTGA TAAACTTTAA AGTAGATTAC GAACTGCTTA AAAATTTGGT ATTCTCTACT
CGTGCAAATG TAGATTACAT TTCATCAGAT TATAAAGACT ATCAAAACAG GATACATAGT
AATGCTTCTA AAAATAACGG GTCTTCACAG CGTATAATGG CTAACCACAC TACTTGGGTA
TATCAAAACA CATTAACATA CAATTTTAAT GTGGCCGAAA AGCATAAATT TGGTGTAACA
GCACTTTATG AATATCAAAA GTACAAAAAA GATTATTTAT ATGGTTATGG TACGAATATA
GCTGTTGATG GTTTAACCAA TCTTGCTTCT GTAACAAAAC AAAAAACAAT ATCTTCTACT
TTCGAAGATT GGGCGAATGT ATCGTTGTTA GGAATGTTTA ACTATTCTTA TGCCGAAAAA
TATATTCTTG ACGCAAGTAT TCGTAGAGAG GGTTCATCTC GTTTTGCAAA AGGAAATCGC
TATGGAAATT TCTGGTCTTT AGGGCTTGCT TACAACCTTC ATAAGGAGTT TGATGCCCTT
GCAAAAGTTT TCAACGAGTT AAAATTAAGA GCTTCTTATG GGCTTACAGG GAACTCTGGG
GTAGAATTAA ACCAATACCA AGTACTTTTA GCTTATGATG CTGAATATGC TGAAAATGGA
GCTGCCTACC CCAAAACGTT AGGGAATGAC GACCTTACTT GGGAGAAAAA CCGTACTTTT
GATGTGGGGC TTAATTTTGC ACTATTTAAC CAGCGCTTAA GAGGCTCTGT TGCATATTAC
GATAAATATA CGTATGATTT GTTGCTAAAT GTGCCTTTGT CAAGAACCAC AGGTTTTGAA
GAGCAGGCTA TTAATGCAGG AGCAATGAGC AATAAAGGTG TTGAGGCTTC ATTAGGGGTT
GATATTATCC GTAATAAAAA CTTCACTTGG AACTTGTCAG CTAATATAGC AACGGTTAAA
AACAAGGTAG AAAAATTGGC AAAAGATGGC ACAGGCGCCG ATGTAGACCC AACAGCAGGG
AGTTCATACA GACAAACCAA AGTGGGAGAA ACCTACGGCT ATTGGTATAT GCCAACTTGG
GCAGGTGTCA ATGTAGATAA AGGGCTTCCT GAGTGGTATG ACAAAGATGG CAAGAAAACA
TCAGACTATA ACCTCGCAGA GCGAAGATTC CAAGGTATTG CCATTCCAAA ATATTCAGGA
GGTCTGTCTA CTCACCTTCA ATATAAAGGG GTATTCTTAG ATGCAACTGT TTATTTTACA
GGAGGACATA AAATATATGA GCAGTATGCT CAATACTATT TGAGAACCAA TAATTTTACA
ACGGTAACTT ATAATGGAGA TGCTGAGTTG CTAAATGCTT GGCAAAAACC AGGAGATGTA
ACCGATGTGC CAAAAATAAC CTATTCAGGC AATGATAATT TTCATAATAC TTCTTCTCGT
CACTTATACG ATGGTACTTT TGCGCGCTTG AAAGATATTA CATTGGGTTA TGAAGTGCCT
TCTCAATATT TAGAAGGAAC AGGTTTTGAT GGAGTTACCT TTACCCTTAG AGGTACTAAC
CTTTATACTT GGGTGAAAGA CAGCGGGCTA AAACTCGACC CAGAAGTAGG TAATAAAGAT
AACACAAGGG GATTTACTAC CCTTACAACT CCACCTGTGA AATCTGTAGT TTTTGGTGTT
AATTTAAAAT TCTAA
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| Protein sequence | MRLNKVSFAL FLILIVQGFS WAQEREVTGT VRDASGTEMM GVAVVVKGEQ HGVQTDFNGR
YSIKVAPGKT LEFSFLGMKT QNHKVGPSGR IDVVMQEEAQ VIDEVVVLGV VKKKAAESTG
NTVQLSSKDI STPSAISVDQ ALQGKTPGVV INAASGTPGA EQTVMIRGVG SMNSSNKPLY
VIDGVPVITE NLTEDKNTAS SMSTLASINN EDIETLTVLK DAAATALYGA RGSNGVIVIT
TKSGKRGKTR FNVNTSVGFQ NDAYYKRSPL TGDQRYHLLK QGLANQFASR GVTYDTAIDF
AQTNGLRING AENFNSALNN NNWSELIKNK NAVMTSADIS ASGGDEKGTY YVSLGYNRTE
STVKTSDPFK RVSGLIRINR DLNDKLKLEA SVNGSWVSQN PIAEQSAYFT NPYVTKILMS
PWVSPYNADG SYNVTTFNDY TSLYNYLYIK DHDISKNNTL RGLINFKVDY ELLKNLVFST
RANVDYISSD YKDYQNRIHS NASKNNGSSQ RIMANHTTWV YQNTLTYNFN VAEKHKFGVT
ALYEYQKYKK DYLYGYGTNI AVDGLTNLAS VTKQKTISST FEDWANVSLL GMFNYSYAEK
YILDASIRRE GSSRFAKGNR YGNFWSLGLA YNLHKEFDAL AKVFNELKLR ASYGLTGNSG
VELNQYQVLL AYDAEYAENG AAYPKTLGND DLTWEKNRTF DVGLNFALFN QRLRGSVAYY
DKYTYDLLLN VPLSRTTGFE EQAINAGAMS NKGVEASLGV DIIRNKNFTW NLSANIATVK
NKVEKLAKDG TGADVDPTAG SSYRQTKVGE TYGYWYMPTW AGVNVDKGLP EWYDKDGKKT
SDYNLAERRF QGIAIPKYSG GLSTHLQYKG VFLDATVYFT GGHKIYEQYA QYYLRTNNFT
TVTYNGDAEL LNAWQKPGDV TDVPKITYSG NDNFHNTSSR HLYDGTFARL KDITLGYEVP
SQYLEGTGFD GVTFTLRGTN LYTWVKDSGL KLDPEVGNKD NTRGFTTLTT PPVKSVVFGV
NLKF
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