| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0491 |
|---|
| Symbol | |
|---|
| ID | 8366902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 628890 |
|---|
| End bp | 629573 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644982917 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_003140615 |
|---|
| Protein GI | 256819336 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTAA CTTATTACGG ACACTCGTGT GTGAGTATCA AAATAGGCGA TACACATTTG
CTTGTAGACC CGTTTATTGC TAATAATCCT TTGGCAAGCC ATATAGATAT CAATACGATT
CCTGCTGATT ACATCTTGAT AACCTCGGCG CAACAAGACC ATATATCGGA CGTGGAGCAG
ATAGCTAAGC GCACGAAAGC GCAAATCATT TCGAATTTTG AAATCTCTAA TTACTTTTTT
AATTTGGGAA TAGAAAATTC GCACCCTATG GACTTGGGAG GGTTGTACAG TTTCTCATTT
GGGTCGGTGA AGATGGTACC GGCGTTGCAT TCTTCTACCT TCGAAAATGG CACTGCCGGC
GGGTGCGCTT GTGGGTTTGT GATTAAAACT TTGGAAAAGA CGGTATATGT ATCGGGGGCT
ACGGCTTTGT ATTTTGATAT GCAACTCATA CCGGTGCGTT ATAAATTGGA CTTAGCTATA
TTGCCCATTG GAGGTAACTT TACAATGGAC GTGGAAGACG CTATTATGGC TTCGGACTTT
GTGAAATGCA ACAAGGTGTT GGGGTATCAT TACGACACTT TTAACCTCAT TAAGTTAGAT
GATAAGGATT TAGCAAAGAG AAGTTTTAAG GCAAAAGGCA AAGAATTGAT ATTAACAGAT
ATAGGACAAT CTATTTTTGT ATAA
|
|---|
| Protein sequence | MEVTYYGHSC VSIKIGDTHL LVDPFIANNP LASHIDINTI PADYILITSA QQDHISDVEQ
IAKRTKAQII SNFEISNYFF NLGIENSHPM DLGGLYSFSF GSVKMVPALH SSTFENGTAG
GCACGFVIKT LEKTVYVSGA TALYFDMQLI PVRYKLDLAI LPIGGNFTMD VEDAIMASDF
VKCNKVLGYH YDTFNLIKLD DKDLAKRSFK AKGKELILTD IGQSIFV
|
|---|
| |