Gene Coch_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0469 
Symbol 
ID8366875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp600072 
End bp601340 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content40% 
IMG OID644982890 
Producthypothetical protein 
Protein accessionYP_003140593 
Protein GI256819314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAG ATTTCTTACA CTACCTATGG AAATACAAAA AAGTACCTCT CAACGCTGTA 
CTTACTACAG GAGAGCGTTT GCAAATTCTC TCATTTGGTG ACTATAATTC CCTTTCAGGT
CCCGATTTCC AAAGTGCTCA ACTGCTTATA GGTGAACAGC AATGGGCAGG TAATGTAGAA
ATGCATCTCA AATCATCGGA TTGGTATGTG CACGGTCACG AAAGTGATCC CGCCTATCGC
AATGTGATTC TGCACGTAGT TTGGGAACAC GATATAGAAG TATTCGATGC TAACAACCAG
CCAATTCCCA CTTTAGAACT CCGAGAACTC ATCTCCCCCG AACTCTTAAA GCGATACAAA
ACCACTGTAG CCTCACATTG TCAGTTTATT CCTTGTGAAA AGGAATATAC TACTGTGCCA
GCGATTACTT TACTTTCGTG GAATGAGCGT CTGTTAGTAG AACGTTTAGA AGAAAAAGCT
ACTGTTGTGA ACGAGTTGTG GAAAGCTACT AATTTTGATT GGGAGAAAGT ACTTTTTTGT
ATGCTTCTCA AGTCTTTTGG TGGCACCGTA AATGGTGAAG CATTTCTGCA ATTGGGCAAA
TATATCGATT TTGGTATTAT CCGCAAAGAA CGCTCACACC CCTTACATTT AGAAGCGCTA
CTATTGGGGC AAGCAGGCTT ACTCCCCAAA GCAACTGAAC TCACCTATCC ACGTGAACTC
TTGCAAAATT ATCACTACCT ACAACAGAAA TACAATCTCT CTGCACCTGT AGTAAAAATA
CATTTCACTG GTTTGCGTCC GCAAGGGTTT CCTACTATCC GACTCTCGCA ACTCGCACAG
CTATACGAGC TAAATGAAGG TTTGTTTTCT AAAATCCTCG AAGTGAATGA TTTTAAAAGT
ATCCAAAAAC TTTTTGCCGT AGCAGTCTCC GAATTTTGGG AAACCCACTA TACCTTTACT
AAGACTTCTA AAAAAGTAAA AAAGCCTATT AGTGCAAGCC TTATTACACT TATTTGGATA
AATGTATTCA TTCCACTCAA ATATGCCTAT TACCAAAGTT TAGGCAAGGA CGTGAGCGAA
TCTCTCATTG AAGAACTCAA AATAATGACA GCCGAGAGCA ACAGCATAAT CACCCAATAC
CAACAATTAG GTGCCACCGT TACCACCGCT TTTGATACCC AAGTACTTCT ACAACAGTAC
AAACACTATT GCCAGTCCAA ACGTTGTTTA GATTGCGCTA TAGGGATTTC GATTTTAGGT
AAGAGGTAA
 
Protein sequence
MKEDFLHYLW KYKKVPLNAV LTTGERLQIL SFGDYNSLSG PDFQSAQLLI GEQQWAGNVE 
MHLKSSDWYV HGHESDPAYR NVILHVVWEH DIEVFDANNQ PIPTLELREL ISPELLKRYK
TTVASHCQFI PCEKEYTTVP AITLLSWNER LLVERLEEKA TVVNELWKAT NFDWEKVLFC
MLLKSFGGTV NGEAFLQLGK YIDFGIIRKE RSHPLHLEAL LLGQAGLLPK ATELTYPREL
LQNYHYLQQK YNLSAPVVKI HFTGLRPQGF PTIRLSQLAQ LYELNEGLFS KILEVNDFKS
IQKLFAVAVS EFWETHYTFT KTSKKVKKPI SASLITLIWI NVFIPLKYAY YQSLGKDVSE
SLIEELKIMT AESNSIITQY QQLGATVTTA FDTQVLLQQY KHYCQSKRCL DCAIGISILG
KR