| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0444 |
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| Symbol | |
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| ID | 8366850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 565841 |
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| End bp | 567337 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644982865 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003140568 |
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| Protein GI | 256819289 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAT ACATATACCT TGCACTCTCG TTAGTAGCAC TAACGGCGTG CAGTTTAGAT
AAAGACCCTA TTTCGGAGTT CAACGAGAAA AACACAACTA CCGAGGGCAA AAGCTCTTCT
GCCATAGAAA CCAAAGCACA AATGCAAACT CGCTACGATG CTATCTATGC TTTTGTACGA
GGTAGCGCGC AAGAGTTCTG GACGTTAGAC TTTCTACAAA ATACCGAAAC TCGTGCCGAT
AACGCTTATG CAGGTACTTC TGGTGTCGAA ATTACTTCTA TAGAACAGAA CAGCCAAGAT
GCATCTAACG GAAATATAAA ACGTGATTGG CAAAAATACT TAGAAGGCAT CAACTTAGCC
AATGTAGTAA TTGCTAATGT AGACAAAGTG CCCGATGCCT CGCTTACAAC AACTGAACGA
AAACAGTGGA AAGCCGAAGC TAAAATACTC AAATCGTGGC TTTTATTCGA TATGGTGCGC
TTTTGGGGAG CAGTACCTAT TCCTCCTATT GAAGTCCCTG AAATATCATC TAAAAATGTA
GAAGAAACCT ACAAATTGCT CTTTCCTGAA CGCACTTCAG TTGCCGAGGT GTACAACATC
ATTCGCACCA ACCTCGAAGA GGCTCTCGTC GATGCTCCTG CTGTGAAGGC TAACGATAAG
TTCTTTTTCA GTCGTGCGGT AGCTAATGCA CTCTTAGCTC ACGTATATGC CGAAAAACCT
ATACGCGACT ACAACAAAAC TATTCAGTAT TGCGCAGCCG TAGAAGCCGA TGGCTTTACT
CTCTTGCCTA ATTACGCCGA TTTATTTCAA ATCAACGATG CTAAAACCGA TGTAAAAGTG
CGTAATTCAG CTGAGTCTAT CTTCGAGATT ACCTACTCTC AAGGCGGACA GACTTGGTTA
CCGGGACTTT TTGGATTGAA CTACACCAAC CCCAATAGCA CTTACAACTG GGCAAAATGG
GTAACCCCTT CACGCGACCT CATAGCTGCT TTCGATGCCG AGGGTGATAC TGTGCGCAAA
GATCAAGCTA TCGTTTGGGG GCAACCTTCG TGGAAAATCT ATTACCCTTC TGAACACTAT
CCTTTTATGT ACAAAATACG TTCAGGAGGC AGTAGCATCA TTAAGTTGCG TTTAGCCGAT
ATCCTCTTGC TCAAAGCCGA AGCTTATGCC GCTTTAGGTC AAACTGCTCA GGCGGCTGCC
TTAGTAAATC AAGTGCGTGC AAGGGTAGGA CTTGCTACTA TTTCCAGCTC TCTTTCACAA
GAACAAATGA AAGAAGCTGT ACTTAAAGAA CGCCGTTTAG AACTCGCTTT CGAGGGCTTC
CGTTGGTTCG ATTTGGTGCG TAACGATAAA GCCATTGAAA CAATGAACTC TCTCAACGCA
AGAGATACTG GTAGACTAAA ACAAACCTAC CCGCTCAACG AGAACACAGT GCTTTATCCT
ATCCCACAAA CTGAATTAGA AAACAATAAA AAACTCACCC AAAACCCTGG TTACTAA
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| Protein sequence | MKRYIYLALS LVALTACSLD KDPISEFNEK NTTTEGKSSS AIETKAQMQT RYDAIYAFVR
GSAQEFWTLD FLQNTETRAD NAYAGTSGVE ITSIEQNSQD ASNGNIKRDW QKYLEGINLA
NVVIANVDKV PDASLTTTER KQWKAEAKIL KSWLLFDMVR FWGAVPIPPI EVPEISSKNV
EETYKLLFPE RTSVAEVYNI IRTNLEEALV DAPAVKANDK FFFSRAVANA LLAHVYAEKP
IRDYNKTIQY CAAVEADGFT LLPNYADLFQ INDAKTDVKV RNSAESIFEI TYSQGGQTWL
PGLFGLNYTN PNSTYNWAKW VTPSRDLIAA FDAEGDTVRK DQAIVWGQPS WKIYYPSEHY
PFMYKIRSGG SSIIKLRLAD ILLLKAEAYA ALGQTAQAAA LVNQVRARVG LATISSSLSQ
EQMKEAVLKE RRLELAFEGF RWFDLVRNDK AIETMNSLNA RDTGRLKQTY PLNENTVLYP
IPQTELENNK KLTQNPGY
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