| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0189 |
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| Symbol | |
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| ID | 8366594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 225334 |
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| End bp | 226071 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982609 |
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| Product | TonB family protein |
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| Protein accession | YP_003140313 |
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| Protein GI | 256819034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.700482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACCTA AAAAAAATCC GAAAGCCGAT TTGGCAAAAA GTAGCGGATT GTTCTTTGCC
ATAGGATTCG CTCTTGTATC AGCCCTTACC TTATGGGGGT TCGAAACAAA AGTGTATGAC
AAAAGCGTTC AAGACAACCG TACGTCAGAT GTGGATAAGG CTCTTGACGA AAATCAAGAG
AACTACACAA TGGAGACCCC TCCTGAAACT CCACCACCTC CACCACCTCC AGCCCCTACA
GTGGTAGAGG AAGTAAAAGT AGTGGAAAAC GATACTAAAA TCGAAGAACA AGTAATTGGT
ACTACTGAAA CTACTAAAAA TGAGCAAATA GCTAAAGTAG AAGAAATTAA ACAAACTGTA
GTAGAAGAAG CTCCTGATGT AGATGTGCCT TTTACTATTA TCGAAGATAA ACCTATGTTC
GAAGCTTGTA AAAACGTTCC TAAAGATCAA CAAATGAAAT GTTTTCAAGA AAACTTGAAC
AAACACGTAG TAAAGAACTT TAGCTATCCA CAAGCTGTCG CCGAAATGGG TATTCAAGGA
AAAGTATTTG TAAACTTCCG CATCAATACC GATGGTACTA TTACCGTTTT AGGAGTGCGT
GGTCCCGATA AAATTTTGGA AGATGATGCT AAGAAGCTTA TTATGAAACT TCCTAGACTT
ATCCCTGGTA AACAACGTGG TAAACCTACA CCAGTTACCT TTGCTTACCC TATCAACTAC
AAATTACAAA ACAACTAA
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| Protein sequence | MQPKKNPKAD LAKSSGLFFA IGFALVSALT LWGFETKVYD KSVQDNRTSD VDKALDENQE
NYTMETPPET PPPPPPPAPT VVEEVKVVEN DTKIEEQVIG TTETTKNEQI AKVEEIKQTV
VEEAPDVDVP FTIIEDKPMF EACKNVPKDQ QMKCFQENLN KHVVKNFSYP QAVAEMGIQG
KVFVNFRINT DGTITVLGVR GPDKILEDDA KKLIMKLPRL IPGKQRGKPT PVTFAYPINY
KLQNN
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