Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0176 |
Symbol | |
ID | 8366578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 212642 |
End bp | 213499 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644982593 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003140300 |
Protein GI | 256819021 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.020767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCG GAATTATTAT CCCTGCTTAT AACGAAGCTG AAAGCATTGG TGTTACCTTG CAATCTCTGC TAAATCAGAC CTATCTTCCC TATCAAATTA TAGTAGTAGA CGACGGTTCT ACCGATACCA CTGCTGAGGT AGTGAACCAA ATTGCTACCC AATATCCCGT AGTACAATTG GTGCAACGCA GTGAGAAGGG TGAACATCTA CCAGGGGCTA AAATAGTGCA GACTTTTAAC TATGGGCTTC CTTACCTAAA AGAAGACGTA GAGGTGATTT GCAAATTTGA TGCCGACCTC ATCTTCCCTA ACAACTATCT CGAAACAATG TGCCAGCAAT ACAGTGAAAA TCCACAGTTG GGAATGTTTG GGGGCTTTTG TTATATTGAG AGAAATGGCT CTTGGGTACT CGAGAATCTC ACTAATAAAG ACCACCTAAG AGGTGCTGTA AAATCTTATC GGAAGGCGTG TTTTGAAGCG ATAGGTGGAC TTAAAATAGC AATGGGCTGG GACACCGCCG ATGAGCTATT GGCGCGCTAC CACAGTTGGA CAGTACAAAC TGACGATACT CTTCACGTAA AACACCTACG CCCGACAGGT GCTGGCTATA AAAGCAATGC CCGTTACCTG CAAGGAAGCG TTTTCTACCG TCTGCGATAC GGTTTCTTCC TCACTTTACT CGCTGCCATA AAATTAGCCA TAAGAAAACG CAATGGTAAA CTCTTCTTAG ATTATTGCAA AGGATTTTAT AAAGCTAAAC AAGAAAAACA ACCTTACTTA CTCACTCCTG AAGAAGGTAA ATGGGTAAGA CAATACCGGT GGAAAGGGAT TTTCAGTAAA GTAGTGAAAA AAAAGTAA
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Protein sequence | MNIGIIIPAY NEAESIGVTL QSLLNQTYLP YQIIVVDDGS TDTTAEVVNQ IATQYPVVQL VQRSEKGEHL PGAKIVQTFN YGLPYLKEDV EVICKFDADL IFPNNYLETM CQQYSENPQL GMFGGFCYIE RNGSWVLENL TNKDHLRGAV KSYRKACFEA IGGLKIAMGW DTADELLARY HSWTVQTDDT LHVKHLRPTG AGYKSNARYL QGSVFYRLRY GFFLTLLAAI KLAIRKRNGK LFLDYCKGFY KAKQEKQPYL LTPEEGKWVR QYRWKGIFSK VVKKK
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