Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0167 |
Symbol | |
ID | 8366569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 201399 |
End bp | 203297 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 644982584 |
Product | hypothetical protein |
Protein accession | YP_003140291 |
Protein GI | 256819012 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.427298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCTA TGAAAAACAT ATATAAAGAA AGTCTATTTC AATCTATAAG TAAGGGTGAG GTAGTTCTTT GGGCAGGGGC AGGCTTGTCT TTGTATGCTG GTTTACCATC AGGAGCACGA CTTAAAGAGA TTCTATACGA AGGCTTAACT CCTTTAGAGA AAGAAGAAGT TAGAAAAAAT TCAGACCTAT CTCATTTAAC AGATGAGATT TGTAAACTTA AAGGAAATAG GAATTATATT ATCAAGGTAC TAACAAGTAC TTTTATAAAA GATTTTTCAT CAACAGAAAC TCACAAAATT ATTTCTAAAA TACCTCATTT CAGGAATATA ATAACAACTA ACTATGATAG GTTATTTGAA AACGCATATG GTAATAAACT AAATCTAATT TTCTCAGACA ACCATACTCC GTATATAGAT GATAAAAAGG TAAATCTTTT CAAAATACAC GGTGATTTAT CAGATCCTGA TTCTATAATT ATAACAAAAT CTGATTATAA TAGATTTTTT GAAAATGATA CAGAACAAAA TACTATTTGG AATATTATCA AAGGAATAGT TGCAACCAAG AGTATCCTAT TTATTGGATA CAATTTAGAA GATTCCAATG TTGAAGTTAT TTTTAATAAA ATAAAGAATA AAACGGGGAA GAATGGTAAA GAATGCTATT TTGTAGCTCC TTATATTCCT CCTATCAAGT CAGTTAATTT AGAGAAAGCA AATATACATC CAATTTCTCT CACAGGAGAA AAGTTCTTTG AAGAGCTAAT AGAATATCTA AAAAAGAATA TCAAAAAAGA CTTTGAAAAT AAAAACATCT CATCGGATGT CTATTCTGAG TTCATAGGCA ATTTTGATTT GAAATCGGAA ATAGAAGTAG ATTCATCAAT AGGGAAAAAT ATTGTGAAAA ATCTTACAGG AATAGAAGGA AAAGATACAA AAATAGAAAT GACATTTTCT GTCAGTAAAT TTTTTGATGA AATCAATAAT AAAGTAAATG ATTTAATAAG TATAGGAGAT ATTTCTGAAG AAATGACTAT TGATAAAGAA ATGTTAAGTA GTTTCAATCT TGATATAAAT GGCATCAGTT ATAGGAATAT CGATGATATC AAAAGTATAA AATTTGCCTT ATTACCTTGT TTCGACAAAA AAATAGATGT CGTCTTTGAA AATGGAAAGG AAATTAATGA TATAAACTTA AAAGTTATTC CTTTAAATAT AATTGGAAGA AAAGCAAAAG TAATAGCTCA GTTCTATGGA AATAAATTAG AAATCGTTTT TTATCCATCA ACAAATAGAG AAATAGAAAC TATATTTTCT TATACAATAT CAAAAGAAAT TAGTAATATT TCCAAGCAAA TACTTTTCTT TGAATTGATT AAGCATCTCT CAATGAGACA GCTTTTTTCA ATTTATGTAG ATGGAAAAAG AGCTTTTGAG GGAAGATTTG GGAAAGAGGC AAGCTTTCTA TCCCCAAAGA ATGAGTTCTA TTTAACTTAT TTTAAAAAAC TAAAGGAAAT TGAAAAGTTA GGTAATTTTC GCTTTTCTAA TATTAATATC AATGATGTTA CTCCTAAGAA TCATAATCTC TTGGAGATAG TTATTGCAAA ATTAAAAAAT AAGCCTATTA AAAAAAGAAG TCCTCAGATT CTTCTAAAAC CAAAAAGTTT TGATTACACA GCATACAAAA ATAATTTTGA TTTGAATTTT ACTCAAAACT TAGGGGATAT AGTTATTCAC AATCAAACTT TTAAGATAGG AGAAATAACA ACACAAATAT CAGACGCTTT TATTTCAAAT TATGAGGAAA TAATAAGTGA TAGAACAAAA TCTCCTATTA TTGAAAGTCG CTCTAAAAGA GCTTTAATAA CATTTAATAA TTTAAAACAG CATACGTAA
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Protein sequence | MESMKNIYKE SLFQSISKGE VVLWAGAGLS LYAGLPSGAR LKEILYEGLT PLEKEEVRKN SDLSHLTDEI CKLKGNRNYI IKVLTSTFIK DFSSTETHKI ISKIPHFRNI ITTNYDRLFE NAYGNKLNLI FSDNHTPYID DKKVNLFKIH GDLSDPDSII ITKSDYNRFF ENDTEQNTIW NIIKGIVATK SILFIGYNLE DSNVEVIFNK IKNKTGKNGK ECYFVAPYIP PIKSVNLEKA NIHPISLTGE KFFEELIEYL KKNIKKDFEN KNISSDVYSE FIGNFDLKSE IEVDSSIGKN IVKNLTGIEG KDTKIEMTFS VSKFFDEINN KVNDLISIGD ISEEMTIDKE MLSSFNLDIN GISYRNIDDI KSIKFALLPC FDKKIDVVFE NGKEINDINL KVIPLNIIGR KAKVIAQFYG NKLEIVFYPS TNREIETIFS YTISKEISNI SKQILFFELI KHLSMRQLFS IYVDGKRAFE GRFGKEASFL SPKNEFYLTY FKKLKEIEKL GNFRFSNINI NDVTPKNHNL LEIVIAKLKN KPIKKRSPQI LLKPKSFDYT AYKNNFDLNF TQNLGDIVIH NQTFKIGEIT TQISDAFISN YEEIISDRTK SPIIESRSKR ALITFNNLKQ HT
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