Gene Coch_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0167 
Symbol 
ID8366569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp201399 
End bp203297 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content27% 
IMG OID644982584 
Producthypothetical protein 
Protein accessionYP_003140291 
Protein GI256819012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.427298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCTA TGAAAAACAT ATATAAAGAA AGTCTATTTC AATCTATAAG TAAGGGTGAG 
GTAGTTCTTT GGGCAGGGGC AGGCTTGTCT TTGTATGCTG GTTTACCATC AGGAGCACGA
CTTAAAGAGA TTCTATACGA AGGCTTAACT CCTTTAGAGA AAGAAGAAGT TAGAAAAAAT
TCAGACCTAT CTCATTTAAC AGATGAGATT TGTAAACTTA AAGGAAATAG GAATTATATT
ATCAAGGTAC TAACAAGTAC TTTTATAAAA GATTTTTCAT CAACAGAAAC TCACAAAATT
ATTTCTAAAA TACCTCATTT CAGGAATATA ATAACAACTA ACTATGATAG GTTATTTGAA
AACGCATATG GTAATAAACT AAATCTAATT TTCTCAGACA ACCATACTCC GTATATAGAT
GATAAAAAGG TAAATCTTTT CAAAATACAC GGTGATTTAT CAGATCCTGA TTCTATAATT
ATAACAAAAT CTGATTATAA TAGATTTTTT GAAAATGATA CAGAACAAAA TACTATTTGG
AATATTATCA AAGGAATAGT TGCAACCAAG AGTATCCTAT TTATTGGATA CAATTTAGAA
GATTCCAATG TTGAAGTTAT TTTTAATAAA ATAAAGAATA AAACGGGGAA GAATGGTAAA
GAATGCTATT TTGTAGCTCC TTATATTCCT CCTATCAAGT CAGTTAATTT AGAGAAAGCA
AATATACATC CAATTTCTCT CACAGGAGAA AAGTTCTTTG AAGAGCTAAT AGAATATCTA
AAAAAGAATA TCAAAAAAGA CTTTGAAAAT AAAAACATCT CATCGGATGT CTATTCTGAG
TTCATAGGCA ATTTTGATTT GAAATCGGAA ATAGAAGTAG ATTCATCAAT AGGGAAAAAT
ATTGTGAAAA ATCTTACAGG AATAGAAGGA AAAGATACAA AAATAGAAAT GACATTTTCT
GTCAGTAAAT TTTTTGATGA AATCAATAAT AAAGTAAATG ATTTAATAAG TATAGGAGAT
ATTTCTGAAG AAATGACTAT TGATAAAGAA ATGTTAAGTA GTTTCAATCT TGATATAAAT
GGCATCAGTT ATAGGAATAT CGATGATATC AAAAGTATAA AATTTGCCTT ATTACCTTGT
TTCGACAAAA AAATAGATGT CGTCTTTGAA AATGGAAAGG AAATTAATGA TATAAACTTA
AAAGTTATTC CTTTAAATAT AATTGGAAGA AAAGCAAAAG TAATAGCTCA GTTCTATGGA
AATAAATTAG AAATCGTTTT TTATCCATCA ACAAATAGAG AAATAGAAAC TATATTTTCT
TATACAATAT CAAAAGAAAT TAGTAATATT TCCAAGCAAA TACTTTTCTT TGAATTGATT
AAGCATCTCT CAATGAGACA GCTTTTTTCA ATTTATGTAG ATGGAAAAAG AGCTTTTGAG
GGAAGATTTG GGAAAGAGGC AAGCTTTCTA TCCCCAAAGA ATGAGTTCTA TTTAACTTAT
TTTAAAAAAC TAAAGGAAAT TGAAAAGTTA GGTAATTTTC GCTTTTCTAA TATTAATATC
AATGATGTTA CTCCTAAGAA TCATAATCTC TTGGAGATAG TTATTGCAAA ATTAAAAAAT
AAGCCTATTA AAAAAAGAAG TCCTCAGATT CTTCTAAAAC CAAAAAGTTT TGATTACACA
GCATACAAAA ATAATTTTGA TTTGAATTTT ACTCAAAACT TAGGGGATAT AGTTATTCAC
AATCAAACTT TTAAGATAGG AGAAATAACA ACACAAATAT CAGACGCTTT TATTTCAAAT
TATGAGGAAA TAATAAGTGA TAGAACAAAA TCTCCTATTA TTGAAAGTCG CTCTAAAAGA
GCTTTAATAA CATTTAATAA TTTAAAACAG CATACGTAA
 
Protein sequence
MESMKNIYKE SLFQSISKGE VVLWAGAGLS LYAGLPSGAR LKEILYEGLT PLEKEEVRKN 
SDLSHLTDEI CKLKGNRNYI IKVLTSTFIK DFSSTETHKI ISKIPHFRNI ITTNYDRLFE
NAYGNKLNLI FSDNHTPYID DKKVNLFKIH GDLSDPDSII ITKSDYNRFF ENDTEQNTIW
NIIKGIVATK SILFIGYNLE DSNVEVIFNK IKNKTGKNGK ECYFVAPYIP PIKSVNLEKA
NIHPISLTGE KFFEELIEYL KKNIKKDFEN KNISSDVYSE FIGNFDLKSE IEVDSSIGKN
IVKNLTGIEG KDTKIEMTFS VSKFFDEINN KVNDLISIGD ISEEMTIDKE MLSSFNLDIN
GISYRNIDDI KSIKFALLPC FDKKIDVVFE NGKEINDINL KVIPLNIIGR KAKVIAQFYG
NKLEIVFYPS TNREIETIFS YTISKEISNI SKQILFFELI KHLSMRQLFS IYVDGKRAFE
GRFGKEASFL SPKNEFYLTY FKKLKEIEKL GNFRFSNINI NDVTPKNHNL LEIVIAKLKN
KPIKKRSPQI LLKPKSFDYT AYKNNFDLNF TQNLGDIVIH NQTFKIGEIT TQISDAFISN
YEEIISDRTK SPIIESRSKR ALITFNNLKQ HT