| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0158 |
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| Symbol | |
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| ID | 8366560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 186676 |
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| End bp | 188541 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982577 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_003140284 |
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| Protein GI | 256819005 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.413762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAA AAAAATTCGA TTTAAAGAGT ATTATAGGTT TTACCTTGAT TTTTATACTT
TTGATGTGGT TTATGAATAA CAATAAACCA AGTGAAGAAG AATTAGCTAA ACGCAAAGCA
CAACAAGAAC AACAAGCAAA TCAAGCTACT AACACCCAAA AAGACACCCA TACCGCTACC
TTCCAAGGTA TCCCTACTGA TTCGGTAGCC TTAGAAAAGT ACAAAGCCAG CTTAGGAGCT
TTTGCCTATT CGGCTACTCT ACCGTCGGCT AAAGACGGGG TGACTGTATT GGAAAACAAA
GATATCAAGC TCACTATCAG CAACCGGGGC GGACAACCCA AGGAGGTTTT GCTCAAAGAA
TTTAAAACTT ATGATTCTTT ACCTGTTTAC TTAATTAAAG ATTGGAATGC TACTTTTAAC
CTCAGTTTTA CTACTGCTCA GAACCAAACC CTAAGTTCTA AAGACTTGTA CTTTGAGCCT
ACGCTAAACG AAAACAACGG CAACAAAGTG CTTTCGATGA AGCTCAAAAC TTCAGAAAAC
GCTTATTTAG AATATGTGTA CACCCTACCA AAAGAAGGTT ATATGTTGGA CGTGGCAGTG
CGCTCACAAG GTTTATCGGG TGTTGTGAAT ACTTCTAAGC CTATGAACAT CGACTGGAAG
TTACAGGCAC GCCGTATGGA GAAGAGCGTC ACCTATGAAA ACCGTTATAC GCAAGCGACG
GTGCAGTACG ACGGCGACCG CATTAGCCGC TTGAGTCAAG GAGGTAATGA CGAGCAAAAA
GAAGAGAAAG TGAACTGGGT GGCTTACAAA CAACACTTGT TTACATCGGT GCTCATTTCT
GACAACCCGT TTGCCAAAGG CGATTTTGTT TCTCACAATA TCGCTATGAG CGAAGGAAAA
GATGTAAAAT ATACCAAGAA CTTCCTTACT TCTTTGCCTA TACAAGCGAA AAGCGGAGAG
CTAAGCGAGT CGTTACACTT CTATTTTGGA CCTAGCGATT ACAACGTGCT CAAACAGTAC
AACGACAAGT ATGAACTTAC TGAGCTCATT CCGTTAGGCT GGGGTATTTT TGGTTGGCTC
AACAAATGGT TGTTCATTCC GCTTTACAAC TTCCTCACTA ATTATTTCTC GGTAGGATTG
GTGATTATTT TGATGACCAT TATCGTGCGT TTATTATTGT CTCCTATCGT TTACAAATCG
TACGTATCGC AGGCTAAGAT GAAGGTATTG CGCCCTGAGA TTGAGGAAAT CAACAAGAAA
TATGAAGAAC CTATGAAACG CCAACAAGAA ACTATGGCAC TCTACAACAA AGCAGGTGTG
AACCCGCTCA GCGGTTGTAT TCCTGCTCTG TTACAGTTAC CTGTGTTCTT GGCACTCTTT
AACTTCTTCC CTACCGAATT TGGATTGAGA CAAAAGAGTT TTTTATGGGC TCACGACCTA
TCGTCATACG ATGCTATTTT TGAACTTCCT TTCTCTATAC CGTTCTACGG AAGTCACGTG
AGTTTGTTTC CATTGTTGGC TTCTATCGCT ATTTTCATCT ACTCAATGAT GACAATGGCA
CAGACTGCAC AACCTCAGCA ACCTGGAATG CCTAATATGA AGTTCCTCAT CTACTTATCA
CCAGTGATGA TGTTGTTCTT CTTTAACAAC TACGCCAGCG GACTGAGTTT GTACTACTTT
ATATCTAACC TATTGACCAT AGGCATTATG TTGGCTATCA AGTATTGGAT TATAGACGAG
CAGAAGATTC ACGCACAGAT ACAAGAAAAC AAGAAAAAAC CTAAGAAGGA AAGTAAATTC
CAAGCCAAAA TGCGTGAGAT GATGGAGCAA GCCGAAGCCC AACGCAAGGC ACAACAGAAG
AGATAA
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| Protein sequence | MEEKKFDLKS IIGFTLIFIL LMWFMNNNKP SEEELAKRKA QQEQQANQAT NTQKDTHTAT
FQGIPTDSVA LEKYKASLGA FAYSATLPSA KDGVTVLENK DIKLTISNRG GQPKEVLLKE
FKTYDSLPVY LIKDWNATFN LSFTTAQNQT LSSKDLYFEP TLNENNGNKV LSMKLKTSEN
AYLEYVYTLP KEGYMLDVAV RSQGLSGVVN TSKPMNIDWK LQARRMEKSV TYENRYTQAT
VQYDGDRISR LSQGGNDEQK EEKVNWVAYK QHLFTSVLIS DNPFAKGDFV SHNIAMSEGK
DVKYTKNFLT SLPIQAKSGE LSESLHFYFG PSDYNVLKQY NDKYELTELI PLGWGIFGWL
NKWLFIPLYN FLTNYFSVGL VIILMTIIVR LLLSPIVYKS YVSQAKMKVL RPEIEEINKK
YEEPMKRQQE TMALYNKAGV NPLSGCIPAL LQLPVFLALF NFFPTEFGLR QKSFLWAHDL
SSYDAIFELP FSIPFYGSHV SLFPLLASIA IFIYSMMTMA QTAQPQQPGM PNMKFLIYLS
PVMMLFFFNN YASGLSLYYF ISNLLTIGIM LAIKYWIIDE QKIHAQIQEN KKKPKKESKF
QAKMREMMEQ AEAQRKAQQK R
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