| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0066 |
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| Symbol | |
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| ID | 8366468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 87055 |
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| End bp | 89850 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644982485 |
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| Product | AsmA family protein |
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| Protein accession | YP_003140192 |
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| Protein GI | 256818913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.255308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT ATATCCTCAA AAGTTTAAAG ATATTGGGTG TGCTGATAGC ATTGCTATTG
GCATTCATTA TCATTTTTCC AATGGTGTAC CCTGAATACG TAACTGAGAA AGTTAAGAAG
CTTGCCAATG ATAATCTGAA CGGAGAAATC AACTTTTCTA AAGCTAAGTT ATCTTTCTTT
ACCCATTTCC CATCGCTTAC GCTTAACCTT GATAACTTCT TGATGAAGGG CTCTAAACCC
TATGAGAATG ATACGCTTGT GGCAGTAAAG CAAATTTCTT TGGGGATAGA CGTAAAGGAT
TTGTTGTTCT CTAAGAAGAT AGACATAGAG GAGATATACC TTAAAAATGC TTTTGTGCAT
ATAAAAGTAA ACAAACAAGG CGAGGCTAAT TATAACGTTT ACAAATCGTC GGGAGAAGAA
AGTACCTCGG AGAGTGATGA TACACGGGTG AATTTACAGC GTATTGAGCT GAGAAATACC
CGACTGATAT ACGATGATAA ATCGACAGAG ATTTACCTTC AAGCCAATGG TTTTAATTAC
TTAGGAAAAG GAGGCTTAGA GGCTTCTATC TTCGATTTGC GTACCAAAGC AGAAATACAA
TCATTGGATT TTCTTTTTGC AGGGGAAACC TACTTTAAGA ACAAACACGT AAGCGCAGAG
CTAATTACCC AGATTAATAC AAATTCATTG GCTTTTATCT TTCAGCAAAA CAACTTAAAG
ATAAACCGAT TGCCTGTGGA TTTTAAAGGG AAGCTAAACT TTTTAAACAA TGGGTATGAT
ATTGACTTAG AAATACAATC TAAGGATAGC AACCTTGATG ACTTCTTTAC CGCCTTGCCT
CCCCAATTTA CACAATGGCA TAAGAAAGCC ACTCTTAAAG GAAAGACCGA TGTGTTCTTT
TCGATGAAAG GGCAATATAT AGCCTCACAG AATTTAAGTC CCGATATTTA TCTAAAAATG
AAGGTAAGAG ATGGTTATGT AGGCTATAAG CGAGTACCAG CTCCGGCTGA GAATGTGTAC
TTGAACATAG AAACGAGATT GCCTTCGCTA AACGTAGATA AAGTGGCAGT AAAGCTCGAT
TCGGTTTACT TTGATATAGG TAAGGAGTAT TTCTCGGGTA TTGTAAGTCT TGATGGGATA
AAGCCTCCTG TAATTGATGC TAAAATGAGA GCAAACATCA ATGTGGAGAA TGTGATGCAC
TTGATGGATA TGAAGGACTT CCAACTGAAA GGAATGCTCT TGGCAAACGT GAAGAGTAAG
GGTACTTATG CTCCTGAACA ACGATTGTTC CCTATCACGA AAGGGCTTTT GGAGTTCTCC
GATGGTTATG TAAAGACGCC TTACTACCCT AATCCGGTTA CTGATATTCA CTTCAAAGGG
AATATTGAGA ACACTGATGG CTCGATGAAA ACTTTGGCAG TAAATGTGTC TCCTGCGACG
TTCTTGTTTG AAGGAAAGCC TTTTACGGTG AATTTATCGA TGGAGAATTT CGACGATATC
CGATATGATA TACAAGCCAA AGGAGAGTTA GACATAGCCA AAATTTATAA AGTATTCTCA
CAAAAAGGCT TGGAATTAGA AGGTTATGCC AAAGCCGACC TTACCTTACA AGGCACTCAG
AGCGATGCCA CTAATGGGCG TTATCATCTT TTGCACAATA AGGGAGTGAT AGAACTGCGT
AATATCAAAA CTACTACAGA ATACTTGCCT AAACCGTTTA TCATTCAGCA AGGGGTCTTT
CACTTCAATC AAGACAATAT GCACTTTACT GACTTCCGTG CTACCTATGG GAAATCGGAC
TTTTTGATGA ACGGACGGAT GAGCAACGCT ATTAACTTCT TCCTATCAAA CAACCAAGTG
CTGAAAGGAA ACTTTACGGT AAGCTCTAAC TATCTTGATG TAGATGAGTT TATGTATACT
TCCGCCCCTG CTCAAGAGAC AAAAGAAGCG AAGGAAGCAA CGGTTACCAA TGATACTCCA
ACTGAAAAGG GAGTGGTGAT TGTACCTAAA CTTTTTAACT TTAATTTAAA TACCAATCTT
AAAAATGTAG CTTTACAAGG GCTTACTATT CATAATTTGA GAGGTAATAC TCAGCTTAAT
AGAGGAACCT TAGCTTTACA AAACGTGAGT TTTAATATTA TAGGAGTTTC TACACAAATA
AATGCTAAAT ACGCAGATGA AACACCTAAA CGCGCTAATT TTAGTTTTAA GATTAAAGCC
AAAGACTTTG ACGTGCAAAG AGCCTACAAA GAAGTGAAGA TGTTCAGAGA AATGGTGGCA
ATGGCAAAAG ATGCCAAAGG TATTATTTCA TTGGATTACG CCGTAGAAGG GAAGCTGAAT
GATGAGATGT TACCTATTTA TCCTTCAATA AAAGGAGGAG GAGTGCTATC GGTGAAGAAC
GTGCAACTAA AAGGGTTTAA GCTTTTTAAT GTTATCAGTG ATAGAACTGG TACAGACGGA
CTGAGAGATG CTAATCTTTC GACTATTGAC ATCAAGAGTA GTATAAAGAA CAATCTTATC
ACGGTAGAGC GGTTTAAGTT TAAGGTTTCA GGGTTTAGAC CACGTATAGA AGGGCAGAGT
AGCTTTGACG GTAGATTGAA CTTTAAGATG CGTTTGGGCT TACCACCCTT GGGGATTATT
GGAATTCCTA TAAAAGTAAC GGGAACACAA GAAAACCCTA AAATAGGTTT AGGCAAAAAG
TCCAAAGATT TAGAAGAAAC GGAATACGAC CCTAATAACA CAGAAGCTAT CAATGAAGAA
GAACAAAATG GTGAAACTAT ACAAAAAGAG AATTAA
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| Protein sequence | MKKYILKSLK ILGVLIALLL AFIIIFPMVY PEYVTEKVKK LANDNLNGEI NFSKAKLSFF
THFPSLTLNL DNFLMKGSKP YENDTLVAVK QISLGIDVKD LLFSKKIDIE EIYLKNAFVH
IKVNKQGEAN YNVYKSSGEE STSESDDTRV NLQRIELRNT RLIYDDKSTE IYLQANGFNY
LGKGGLEASI FDLRTKAEIQ SLDFLFAGET YFKNKHVSAE LITQINTNSL AFIFQQNNLK
INRLPVDFKG KLNFLNNGYD IDLEIQSKDS NLDDFFTALP PQFTQWHKKA TLKGKTDVFF
SMKGQYIASQ NLSPDIYLKM KVRDGYVGYK RVPAPAENVY LNIETRLPSL NVDKVAVKLD
SVYFDIGKEY FSGIVSLDGI KPPVIDAKMR ANINVENVMH LMDMKDFQLK GMLLANVKSK
GTYAPEQRLF PITKGLLEFS DGYVKTPYYP NPVTDIHFKG NIENTDGSMK TLAVNVSPAT
FLFEGKPFTV NLSMENFDDI RYDIQAKGEL DIAKIYKVFS QKGLELEGYA KADLTLQGTQ
SDATNGRYHL LHNKGVIELR NIKTTTEYLP KPFIIQQGVF HFNQDNMHFT DFRATYGKSD
FLMNGRMSNA INFFLSNNQV LKGNFTVSSN YLDVDEFMYT SAPAQETKEA KEATVTNDTP
TEKGVVIVPK LFNFNLNTNL KNVALQGLTI HNLRGNTQLN RGTLALQNVS FNIIGVSTQI
NAKYADETPK RANFSFKIKA KDFDVQRAYK EVKMFREMVA MAKDAKGIIS LDYAVEGKLN
DEMLPIYPSI KGGGVLSVKN VQLKGFKLFN VISDRTGTDG LRDANLSTID IKSSIKNNLI
TVERFKFKVS GFRPRIEGQS SFDGRLNFKM RLGLPPLGII GIPIKVTGTQ ENPKIGLGKK
SKDLEETEYD PNNTEAINEE EQNGETIQKE N
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