Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0056 |
Symbol | |
ID | 8366458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 72861 |
End bp | 75338 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644982475 |
Product | ATP-dependent protease La |
Protein accession | YP_003140182 |
Protein GI | 256818903 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATATA GTAACGATCT AAATATGAAT ATAGGAAATT TTGACAGCCT TTTGGCTGAA CATATAGACG AAGATACAGA GTTTATTCCG CTTCTTACTT TGGAAGATGA AGAAGAGATA GAACGCGAAC GCATACCACA CGTGTTACCT ATTCTTCCCT TGAAAAACAC TGTGCTATTT CCAGGAGTAG TAGTGCCTAT CAGTGCGGGG AGAGATGCGT CTATTCACCT TATCAACGAG GCATATGCTA CTACTAAGAC TATTGGTGTT GTAGCTCAAT TAGACGAGAA GACCGAAATA CCTGAGGGCA AAGACCTCTT TCGTTTTGGT ACGGTAGCCC GTATTCTCAG AGTATTGAAA ATGCCCGACG GCAATGTAAC TATTATCATT CAGGGTAAAA AGCGCTTCGA GATAGAGAGT ATTGTAGAAG AAAAGCCGTA CATCAAAGCG ATGATAAAAG AGATGCCAGA TGTGAAACCC GATGCGAACG ATAAGGAGTT TGAAGCGACT ATTGAAGCTG TGAAAGACCT CTCTATCAAG ATTGTACAAG AAAATCCGAA TATCCCTTCG GAAGCGGCTT TTGCTATTAG GAATATAGAG AGCACATCGT TCCTGATTAA CTTTATATCG TCCAATATGA ATGCTACTGT TTTGGAAAAG CAAGGCGTAT TGGAAATTGA CGAACTAAAA GAGCGCGCTA CGGCTATCTT AAAATATTTG AATATCGACT TGCAACGCCT TACCTTGCGT AACGAAGTAC AGTCGAAAAC GCGTATTGAT ATCGATCAGC AACAGCGTGA ATACTTCTTG CACCAGCAGA TGCGTACTAT TCAGGAAGAA TTAGGAGGCG TGTCGTACGA GCAAGAGATG GAAGAGCTGA AAAAGAAAGC TAAAACCAAG AAGTGGGACG ACAAGATAAA AGAGCTCTTT GAAAAGGAAT TGAGCAAATT GCAACGTACC AATCCTAATA GTCCGGATTA TGGCATTCAG CGTAATTACT TAGAAGTATT ATTGGAATTG CCTTGGAATG AGTATTCTAA AGACAACTTT GACCTAAAAC GCGCTCAGAA AATTCTCGAT AAGGAACACT ACGGATTAGA AGAGGTGAAA CGCCGTATCA TAGAGTATTT GGCGGTGCTT AAACTCCGTA ATGATATGAA ATCACCTATC TTGTGCTTTT ATGGACCTCC TGGGGTAGGG AAGACCTCCT TAGGACGCTC TATTGCCAAA GCTTTGAGCC GTGAGTACGT GCGTATGTCG TTAGGAGGTT TGCACGATGA GGCTGAGATA CGCGGTCACC GCAAAACCTA TATCGGGGCA ATGCCGGGGC GTATTTTGCA ACAGCTTAAA AAAGCTAAGA CTTCTAACCC TGTATTTGTA TTAGATGAGA TAGATAAATT AGGAAACAAT AGTTACCAAG GCGATCCTTC TTCGGCTATG CTAGAAGTGC TCGACCCTGA GCAAAATAAA GAGTTTTACG ACAACTTCCT CGAGATGGGT TACGACCTTT CTAAGGTGAT GTTCATCGCT ACTGCGAACG ACCTTTCGAC CATACAGCCT GCTTTGCTAG ACCGTATGGA GCTTATCAAC GTAACGGGTT ATACCATAGA GGAAAAGACC GAGATAGCTA AACGCCACTT ATTACCTAAG CAACTCAAAG AACACGGTAT GAAAACTACT GACTTGCAAT TAGGCAAAAA GGAAATAGAA CGTATTGTGG AAGGTTATAC TCGCGAATCG GGAGTACGCG CTTTGGAAAA AGAAATAGCG AAAGTAGTAC GCTATGGAGC TAAAAACTTA GCAATGGAAG AAGCCTACGA CCCTAAACTT ACCATAGAGA CCATAGAAAA AATATTGGGA CCTGCCCGCT TAGAACGCGA TAAATACGAA GATAATGAGG TAGCTGGCGT AGTTACTGGA TTGGCGTGGA CGAGTGTAGG AGGAGATATT CTGTTTATAG AATCTGCTTT ATCGAAAGGT AAGGGGGTGC TTAATATCAC AGGTAATTTA GGTCAGGTGA TGAAAGAATC GGCTACTATT GCTTTGGAAT ACCTAAAAGC CAATGCTGAG CGCTATAACC TCAATGTGAA ACTCTTTGAT AGTTACGATG TGCATATACA CGTACCCGAA GGGGCAACCC CTAAAGATGG TCCGAGTGCG GGTATTGCGA TGCTTACCTC ACTAATGTCG CTCTTTACTC AAAAGAGAGT GAAAAAACAC TTGGCAATGA CCGGAGAGAT TACTTTGCGT GGAAAGGTAC TACCGGTAGG TGGACTCAAA GAGAAGATTT TGGCAGGGAA ACGCGCAGGT ATTAAAGAAT ATATTTTGTG CAAAGACAAC GAGAAAGATA TCTTGGAAAT CAAGCAAGAA TACCTTAAAG GGCTTACTTT TCATTATGTA ACGGATATGG AAGAAGTGAT ACGTTTGGCA ATTACCAACC AAGATGTAAA ACACAAAAAA GTTTTAACCT TTGAGTAA
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Protein sequence | MAYSNDLNMN IGNFDSLLAE HIDEDTEFIP LLTLEDEEEI ERERIPHVLP ILPLKNTVLF PGVVVPISAG RDASIHLINE AYATTKTIGV VAQLDEKTEI PEGKDLFRFG TVARILRVLK MPDGNVTIII QGKKRFEIES IVEEKPYIKA MIKEMPDVKP DANDKEFEAT IEAVKDLSIK IVQENPNIPS EAAFAIRNIE STSFLINFIS SNMNATVLEK QGVLEIDELK ERATAILKYL NIDLQRLTLR NEVQSKTRID IDQQQREYFL HQQMRTIQEE LGGVSYEQEM EELKKKAKTK KWDDKIKELF EKELSKLQRT NPNSPDYGIQ RNYLEVLLEL PWNEYSKDNF DLKRAQKILD KEHYGLEEVK RRIIEYLAVL KLRNDMKSPI LCFYGPPGVG KTSLGRSIAK ALSREYVRMS LGGLHDEAEI RGHRKTYIGA MPGRILQQLK KAKTSNPVFV LDEIDKLGNN SYQGDPSSAM LEVLDPEQNK EFYDNFLEMG YDLSKVMFIA TANDLSTIQP ALLDRMELIN VTGYTIEEKT EIAKRHLLPK QLKEHGMKTT DLQLGKKEIE RIVEGYTRES GVRALEKEIA KVVRYGAKNL AMEEAYDPKL TIETIEKILG PARLERDKYE DNEVAGVVTG LAWTSVGGDI LFIESALSKG KGVLNITGNL GQVMKESATI ALEYLKANAE RYNLNVKLFD SYDVHIHVPE GATPKDGPSA GIAMLTSLMS LFTQKRVKKH LAMTGEITLR GKVLPVGGLK EKILAGKRAG IKEYILCKDN EKDILEIKQE YLKGLTFHYV TDMEEVIRLA ITNQDVKHKK VLTFE
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