Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1930 |
Symbol | rpl22p |
ID | 5709557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 2004675 |
End bp | 2005232 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641276438 |
Product | 50S ribosomal protein L22P |
Protein accession | YP_001541737 |
Protein GI | 159042485 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0091] Ribosomal protein L22 |
TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.70908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTATT GGTCTATAAG GGATGAGGAT GTGATTGATT TAGTTAAGAG GAGGTATAAC GTAACCATTA GCGCTGACCA GATAGCTAAG GCTAGGGGCT TTGAGTTTAG GATTAGTTGG AAGAAGGCTA TTGAAACCGC CAGGGCCATT AGGTTCCTTA CAATTAAGCA GGCTGAGGAC TACATGGAGA AGGTTAAGGA CTTAAAGGCC CCGATACCCA TTAAGGAGTT CACTAGGAAG CAGGCTCACC ATAATGTTCC CTGGGATGGT TGGCCAGTGG CTAAGTGGCC TGTTAAGGTA GCTGACTCCT TCCTCCAGGT TTTAAGAAAC CTTGAGAGTA ATGCAAGCTA CAGGGGTTTA AACATTGATA ACACAGTTAT AGTTCATGCA TCCGCAAGCA GGGGTATGAG GATTAGGAAT TACATGCCCA GGGCCCTTGG TAGGGCTACC CCATGGTTCC AGGACACGGT TAACATTGAG CTTGTGGCTG TTGAATTACC CGCTGAATTA GTTCCCAAGA AGTTCAGTTG GGCTAGGGTT CTTAAAGCCA TTAAATGA
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Protein sequence | MRYWSIRDED VIDLVKRRYN VTISADQIAK ARGFEFRISW KKAIETARAI RFLTIKQAED YMEKVKDLKA PIPIKEFTRK QAHHNVPWDG WPVAKWPVKV ADSFLQVLRN LESNASYRGL NIDNTVIVHA SASRGMRIRN YMPRALGRAT PWFQDTVNIE LVAVELPAEL VPKKFSWARV LKAIK
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