| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1868 |
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| Symbol | |
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| ID | 5709740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1941926 |
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| End bp | 1942876 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641276375 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001541675 |
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| Protein GI | 159042423 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.016282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.587494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA GTGGTAATCA AGTGAGGCAG GGGCCGCCTT TATCATCAGT GTTAAGTAAA
ATAGTTAAGA GCTGGATTCC AATAATAATA GCAGGCATTG TGGTTTACAT AATCTATCAC
TTAACCATCT ACACGTTTAA TGTTTCCCCG CGGTTAGCCT ACTTAAGGAA TTATGAGTAC
TTGATTAGGC TTTCACTGGT GTTAATAATA GGTTCAGTGT TAATACTCAC GACCGGTAGG
GAGATAACTA AGGCTCTTTA CCCGTATGAT CCACATACAG CCACTGTCCT TAAGTTCACG
CTTCAATTCC TAATAGCGCT AGCCGTTATA GTATTCGTAA CCGCAAGCAT AGTTCAATAT
AGCCCAGCCG CCGCAGCCCT AAGCGGTACA GTAATAGGCC TAGTGCTTGG TCTAGCCTTC
CAACAAACCC TTAACGACAT AATATCAGGC TTCGTACTGC TTGTATCTAA ACCCTTTAAA
CCAGGGGAGA GGATAACTTT CTTAACTTGG CGTTACGGAT TACTTAGAGC CATGTACCCC
ACAGAGGGTA CTCCAAATGG TTTTACCGGA ACCATAATTG ACATGGGGTT AATGTACACG
ACTATTGTAC TTGATAACGG TGAAGTGGCT AAGGTACCTA ATTCTGTTCT TAAGGACTCA
ATGATAATTA GTAAAAGTGA TGCCAAGTAC CATGCAGTTA GGGTTAGGCT TGATTTACCT
GTTAAAATAT CTGTAAGTGA ATTCGAGAAC GCCTTGAGGG AATTACTGAT TGATGATGGT
GTTAAGGACG TTAAGGTGTT GGCTGAGGAG ACTTGGCAGC AGCTTGAAAC ATATCAAGTA
GCCGTAGTGG CTTATGGTGA TTCCAGGATG AGTATGGAGG AGTTGAAGAG CCTAGTGTTA
AAGAGGGCTA TTGAGGTTAG GAGTAAATTA AGCCAACAAC GATCAAACTA A
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| Protein sequence | MKASGNQVRQ GPPLSSVLSK IVKSWIPIII AGIVVYIIYH LTIYTFNVSP RLAYLRNYEY
LIRLSLVLII GSVLILTTGR EITKALYPYD PHTATVLKFT LQFLIALAVI VFVTASIVQY
SPAAAALSGT VIGLVLGLAF QQTLNDIISG FVLLVSKPFK PGERITFLTW RYGLLRAMYP
TEGTPNGFTG TIIDMGLMYT TIVLDNGEVA KVPNSVLKDS MIISKSDAKY HAVRVRLDLP
VKISVSEFEN ALRELLIDDG VKDVKVLAEE TWQQLETYQV AVVAYGDSRM SMEELKSLVL
KRAIEVRSKL SQQRSN
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