Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1749 |
Symbol | rps8p |
ID | 5709440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1826393 |
End bp | 1826785 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276260 |
Product | 30S ribosomal protein S8P |
Protein accession | YP_001541562 |
Protein GI | 159042310 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.247305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCATGC TTGATGTCTT ATCCAACGCC TTAATGAGCG TAAAGAACGC GGAGTCCAGG GGTGATAGGC AGGTTATTAT TTGGCCATCT TCGAAGCTAA TAGGGAATGT ATTAAGGGTC ATGCAGAGGT ATGGTTATGT TGGTGAGTTT GAGTACGTGT ACGATGGGAG AGGTGGGAAG TATGTTGTTC AACTACTGGG TAGGATAAAT GATATCGGCG CCATTAAGCC CAGGTTCCAT GTTAAGGTTG ATGAACTACA GAAGTGGGAG GAGAAGTACC TACCGGCTAG GCAGGTAGGC ATATTGATAC TAACAACCTC TAAGGGCGTG GTATCTCACC TTGAGGCTAG GGAAAATAGG GTTGGAGGTA TTTTAGTGGC TTATGTTTAC TGA
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Protein sequence | MVMLDVLSNA LMSVKNAESR GDRQVIIWPS SKLIGNVLRV MQRYGYVGEF EYVYDGRGGK YVVQLLGRIN DIGAIKPRFH VKVDELQKWE EKYLPARQVG ILILTTSKGV VSHLEARENR VGGILVAYVY
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