Gene Cmaq_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1531 
Symbol 
ID5709198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1614068 
End bp1615294 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content45% 
IMG OID641276039 
Producttranslation initiation factor IF-2 subunit gamma 
Protein accessionYP_001541344 
Protein GI159042092 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5257] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAT ACACTTACCC GGATTCAATA GTGATAACGG CTGGTCACGT TGACCATGGC 
AAGACAACGG TAGTTCAAGC ACTCAGTAGT GAGTGGGTTG CTAGGCATAG TGAGGAGATT
AAGAGGGCTA TGACGATTAA ACTGGGTTAC ACTAACGTTG ACTTATATGA GTGCGGTGGG
GAGTATCCAA TAGTCCCCAT TGGGTTAATT AAGGATGGTA AATGCCCAGA CGGCTCTGAG
GCTAGGTTCG TTAGGAGAAT ATCAATACTT GACGCCCCCG GTCATGAGGT CTTGCTCTCA
ACAATGATTA GTGGGATTTC ATTCGTTGAT GGTGCGTTAA TGGTTATTGA CGCCTCAATG
CAGGCTCCGC AGCCTCAGAC TGAGGAGCAT TTCATAGCGT TAACAATAAT GGGTACTAAG
AGCCTTGTTA TTGCTCAGAA TAAGGTTGAT TTAGTTAATA GGGATAAGGC CATTGAGAAT
TACATGCAGA TTAGGGGGTT CATAAAGGGT ACTTGGGCTG AGGGGGCGCC TATAATACCG
ATATCGGCGC TTCACAGGGT TAACATTGAT GCCTTAGCCT CAACATTAAA TAACGTGATT
AAGCCTAAGG CAATTGATTT AAGTAAACCA CCAATAATGT ATGTTTTAAG GAGCTTTAAC
GTAAACAAAC CCGGTACACC ACCAAGTAAA CTAATGGGTG GTGTAATAGG TGGTACACTG
CTGCAGGGTA GGATTAGGGT TAATGATGAG GTTGAGATTA GGCCAGGCCT TAAACTTGGG
GATAAATACA TGCCGATTAG GACTAAGGTG GTTAGCATAG CTATTGGAAA CCAGTTAATT
GAGGAGGCTA GGCCAGGTGG ATTAGTGGGT ATTGGTACGT TACTTGACCC AGCATTAACC
AAGGCAGACG CCCTAGTGGG TAGTGTTGTC GGGGAACCAG GTAAATTAGC CCCAGTCTAC
GGGAGCATTG ACATTGAGTA CCATTCAATA AGCAGAAAAG GCATAGATTC ATCACTTAAG
GTTGGGGAAC CGGTAATGGT TATCATTGGG TCAGCCTCAG TAATGGGTAT TGTAAGGAGC
TTCAAAGGCG ACTCAGCATC AATAGACCTC AGGAGAGGTG TCTGCACCCA GGAGGGGGCT
AAGTTAGTTG TCATTAAGCA GGTAACCGGG AGGTGGAGGA TTGTTGGCTG GGGTAAGTTA
AAGGGAGGTA GGGTGCTTTT AGATTAA
 
Protein sequence
MQEYTYPDSI VITAGHVDHG KTTVVQALSS EWVARHSEEI KRAMTIKLGY TNVDLYECGG 
EYPIVPIGLI KDGKCPDGSE ARFVRRISIL DAPGHEVLLS TMISGISFVD GALMVIDASM
QAPQPQTEEH FIALTIMGTK SLVIAQNKVD LVNRDKAIEN YMQIRGFIKG TWAEGAPIIP
ISALHRVNID ALASTLNNVI KPKAIDLSKP PIMYVLRSFN VNKPGTPPSK LMGGVIGGTL
LQGRIRVNDE VEIRPGLKLG DKYMPIRTKV VSIAIGNQLI EEARPGGLVG IGTLLDPALT
KADALVGSVV GEPGKLAPVY GSIDIEYHSI SRKGIDSSLK VGEPVMVIIG SASVMGIVRS
FKGDSASIDL RRGVCTQEGA KLVVIKQVTG RWRIVGWGKL KGGRVLLD