| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1508 |
|---|
| Symbol | |
|---|
| ID | 5709209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1587812 |
|---|
| End bp | 1588150 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641276017 |
|---|
| Product | regulatory protein ArsR |
|---|
| Protein accession | YP_001541322 |
|---|
| Protein GI | 159042070 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.531192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTGG AGATGTTCTT TACCGCATTA TCAGATAGGA GTAGGCTTGA GATTGTGCTT
TTTCTCCTTA ATCATGGTTC ATCCTCTGTT CAGGAGATTA CTAAGGCTCT TGGGAGGTCT
CAATCCCTAA TCTCCCATCA CTTGGCTTGC TTAAGGAATT GCGGTGTGGT TAAGGTGGAG
AGGAGGGGTA AGTACTCATA CTACTCAATA GCAAATGATG CCGTGGCTAG TATTGTGAAA
CTAGCCATTG AGCATGCCAT GAGGAATAGT AGGTCGATAT TAGCGTGTGA TGTAATTAAT
GAGGAGAAGG TGAGTGTTAA TTTAAATCGT GGCTTATGA
|
|---|
| Protein sequence | MALEMFFTAL SDRSRLEIVL FLLNHGSSSV QEITKALGRS QSLISHHLAC LRNCGVVKVE
RRGKYSYYSI ANDAVASIVK LAIEHAMRNS RSILACDVIN EEKVSVNLNR GL
|
|---|
| |