Gene Cmaq_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1486 
Symbol 
ID5709708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1562647 
End bp1563699 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content44% 
IMG OID641275995 
ProductATPase 
Protein accessionYP_001541300 
Protein GI159042048 
COG category[R] General function prediction only 
COG ID[COG1672] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.659076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.220459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTCG ACCCGGAGCC CAAGAGGAGG AGGGAGGATT TCTATGATTA CGATGAGCTG 
CTTCACGAGT TTCAGGAGTC TGTTAGGAAT TATAAAATAA CCCTGGTTAC TGGGCTTAGG
AGGTATGGTA AGACATCACT AATGCTTACT GGACTTAATG AATTAGGCGT TAATCACATA
TTCATTGACT GCAGGCTACT TGGTGATAAA CCAACCCTGA GAGGTTTCAT GGAGTTGATA
ATCAATGAAA TGAGTAAGGA CTCCACGCTA AGGGGAATAC TGGGTAGGTT TGATTTCCTG
GAGGTTGGGG CCCTGGGGTT TAGGCTTAAG GTTAAGTTGA AGGTTAGGAG CGCATTACTT
AGCATTATTG AGGGTTTAAG CAATACTGTG TTGGTTATTG ATGAGGCTCA ATTACTTAGA
AACACTAATT ATAGGTTTGA TGAATTATTA GCCTACATTT ACGATCACGT TAACGTGAGG
GTAGTCATCT CAGGCTCGGA GGTGGGGTTG TTGTATAGGT TTCTTAGGCT TAATGACCCT
GAATCACCCC TCTACGGTAG GTCGATACAT GAGATTAGGA TTAAGCCTTT ACCTAGGGGT
AAATCCATGG AGTTCCTGAG GAGGGGATTT GAGCAGGTTA ATGTGAAGGT TAATGATGAT
GTTATTGAAA GGGCTGTTAA TGAATTAGAT GGGGTAATCG GCTGGTTAAC AATGTTCGGG
TACGAGTATA CTAGGCGTGG TAAAAGCCTT GAGGAGATAA TCCATGAGGC AACACTACTG
GCCGCATCCG AGGTGAATAA GGCACTGGAG ATCCATGGTG CAGCTAGGGC TAGGTTTGTG
GCTGTTCTTG AATCCGTAGC CATGGGTTCA TCAACATGGG GCTCCATTAA GCGTTACGTG
AATGCCAGGC TTGGTTCAAT AAATGACACT GCGTTAAGTA ACGTGATTAA GAGCCTAATG
GATATGGGGT TAATTAGTAA GGTTAATGGT GGCTACGTAA TTAATGACCC AATGGTTAAG
CGTGCAGTGA GCAATGGGTT AATTAAGCCA TAG
 
Protein sequence
MYFDPEPKRR REDFYDYDEL LHEFQESVRN YKITLVTGLR RYGKTSLMLT GLNELGVNHI 
FIDCRLLGDK PTLRGFMELI INEMSKDSTL RGILGRFDFL EVGALGFRLK VKLKVRSALL
SIIEGLSNTV LVIDEAQLLR NTNYRFDELL AYIYDHVNVR VVISGSEVGL LYRFLRLNDP
ESPLYGRSIH EIRIKPLPRG KSMEFLRRGF EQVNVKVNDD VIERAVNELD GVIGWLTMFG
YEYTRRGKSL EEIIHEATLL AASEVNKALE IHGAARARFV AVLESVAMGS STWGSIKRYV
NARLGSINDT ALSNVIKSLM DMGLISKVNG GYVINDPMVK RAVSNGLIKP