Gene Cmaq_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1372 
Symbol 
ID5709867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1446718 
End bp1447794 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content46% 
IMG OID641275882 
ProducttRNA-modifying enzyme 
Protein accessionYP_001541188 
Protein GI159041936 
COG category[C] Energy production and conversion 
COG ID[COG0731] Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.376963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAATA GTGAGGTTAA GGTTAAGTTA AGGTACCATG AATTCATTGA GGGCAAGGTT 
AGGATTAGTG TTGATGCCTT ACCCATGCTT AAGAACGCCC ACTATGGAGT CTACGGTCAC
GCAACGGTTG AATTATGCCA CTGGACTAAG AGTGCCTTGA CAGGTGGACC CAGTTGCTAC
AAGGTTAAGT TCTACGGTGC CCCAGTTGGT GGTTCACATA GGTGTGTTGA AATGGGGCCA
GTGGGTATGA TGTGTAGTAA TAAGTGTGTC TATTGTTGGA GGCCATCAGA GTCCTTTGAC
CCTTATGAGC CTATGAGCCT GGAGGTCATG GATCCAGTGG ATATGGTTAA CGGTATACTT
AAGGAGAGGA GGAGGTTATT GTCGGGTTAC TTTGGTCATG CTAAGAGCAG TAGAGATAAG
GTTAATGAAG CCCTTCAACC AACCCACTGG GCTATTTCAC TATCAGGGGA ACCAACAATG
TACCCTAGGT TACCTGAACT CATAAAGTAC ATTAAATCAC TCCCAAGCAC TAAGTCGGTT
TTCCTAGTCA CCAATGGCCT CTACCCTGAG ATGATTGAGA AGCTTTGGCG TGAGGACGCG
TTGCCAACTC AACTCTACCT AAGCCTAAAC GCGCCAAATA AGGAGTTATT CCTTAAGATA
GCTAACCCCG TGGTTCACAG GGATGATGCC TGGGAAAGGG TTTTAAGGAG CCTTGAATTA
CTAGCCAAGA TACCCACCAG GACTGTGGTT AGGATAACCC TGATTAAGGG TTGGAACACG
GGTAGTGAAC TACTGGGTCA ATTCGCCGAG GTGTTAGGCA TAGGTAATCC ACACTTCATT
GAGCCTAAAT CCTACATGCA TCTAGGTCAT TCAGTGTATA AGCTCAGTAA ACTTAACATG
CTTAGGCATG AGGAGGTTAA GGAGTGGAGT CTAAGCCTAC TGAAGGCCCT TGAGTCAAGG
GGCTTAAGGT ACATATTCAT GGATGAGGAC CCCAATTCAA GGATAACCGT ACTACAGAAC
ATGAATAGGT ACGTTGATAG GTGGATTGAG AAGCCTAGTA GTGAAGCTAA CCCTTAG
 
Protein sequence
MENSEVKVKL RYHEFIEGKV RISVDALPML KNAHYGVYGH ATVELCHWTK SALTGGPSCY 
KVKFYGAPVG GSHRCVEMGP VGMMCSNKCV YCWRPSESFD PYEPMSLEVM DPVDMVNGIL
KERRRLLSGY FGHAKSSRDK VNEALQPTHW AISLSGEPTM YPRLPELIKY IKSLPSTKSV
FLVTNGLYPE MIEKLWREDA LPTQLYLSLN APNKELFLKI ANPVVHRDDA WERVLRSLEL
LAKIPTRTVV RITLIKGWNT GSELLGQFAE VLGIGNPHFI EPKSYMHLGH SVYKLSKLNM
LRHEEVKEWS LSLLKALESR GLRYIFMDED PNSRITVLQN MNRYVDRWIE KPSSEANP