| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1292 |
|---|
| Symbol | |
|---|
| ID | 5708902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1363622 |
|---|
| End bp | 1364872 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641275799 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001541109 |
|---|
| Protein GI | 159041857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0269507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGG AGGGGAAGGG TAAAGATAGG GCCACTATAC TTGGATTAAC ATCAATCGGT
CATTTTATTA ATGATGGTAA TACATGGTTA ATACCAGGTA TAATACTACC AGTACTTAGT
GAAATGGGTG TTAACTACGC TGTAATAGGC TTATTATCAG CATTATACTC AGCTATATCC
GCATTAGCAA GTCCATTAGT GCCGTTAAGC ATTAAGTGGC TTGGCGGTCA TATGAAGGCA
ATGGCCCTCG GCATGTTCCT ATGGGCGTTC GCAATCGGCC TATCGTCAAT CGGCTTCCTA
ATCCATGATC TACCCTTAGT TTATGTAGGT GTAGTGTTAG CTGGAGTTGG TGCAGCTTAC
TATCACCCAA TTGGTAGTGC GCTACTATCC GCCACATACG GTGGAACAGC TGGTTCAGCA
TTAGGGGTAA ATGGTGCATT CGGTAGCCTC GGTAGAACGC TTTACCCATT AATAGGTTCA
TTACTCATAT TCGCGGGATC CGTTAGTGAG GCTTATAATC TGTGGGTGTT GGCCTTTATT
ACGTTTATTG TTGGGCTTTC AGTACTACTC TATGGTGTAT ATAGGTTTGA TGTCCATGCC
TATGGGAAAA GCACCAGTAG GAGTGATCCA TCCAGTAATT CCATGACGCT TAAAGTATCT
GTAATGTTGA TAATCCTACT CTTCATAATC ACATTACTAA GAAACACAGC GGGTCAAGGT
GTTCAGACGT TCCTCGGCAT ATACATAAAT AAGGTGCTTG GCATTAAACT GAGTGTAACG
TATGGGGAGG TTCTTTCAAT GATCCTAGCC TCAGCTATAG TTGGACAGCC GGTACTCGGT
TGGTTAAGTG ATAAGGTGGG TAGGAGGTTT ATGGCTTCGC TCTCAACCTT CGCATTCGCC
GTACTCTTCA TTATTTTCAT ATATACGGGT AATTTAATTG CAGTGTTCTT AGCAATGCTC
TTCGTCTTCA GTAATTTCCC ATTAATAATG GCGGTGCTTG GTGACTTATT CCCAAGGGAG
CAGGTTAGTT GGGCTACTTC AATAATATGG AATGGTGCAG TGACTGGAGG TAATGTGCTT
GGTTCTCTAA TAACTGGTTT ACTTGCTCAA TACTATGAAC CAATATACGG TGAGGTTGGT
GCCCTTGAGC ATGCATTACT CATAGTGCTT ATACTAGCCT TCATATCCAG TGCCCTTTGG
GTAGTTGTAC CTAAACCACC GAAGAGGAGT AGGATTCCGC TTTTCGGTTA A
|
|---|
| Protein sequence | MMQEGKGKDR ATILGLTSIG HFINDGNTWL IPGIILPVLS EMGVNYAVIG LLSALYSAIS
ALASPLVPLS IKWLGGHMKA MALGMFLWAF AIGLSSIGFL IHDLPLVYVG VVLAGVGAAY
YHPIGSALLS ATYGGTAGSA LGVNGAFGSL GRTLYPLIGS LLIFAGSVSE AYNLWVLAFI
TFIVGLSVLL YGVYRFDVHA YGKSTSRSDP SSNSMTLKVS VMLIILLFII TLLRNTAGQG
VQTFLGIYIN KVLGIKLSVT YGEVLSMILA SAIVGQPVLG WLSDKVGRRF MASLSTFAFA
VLFIIFIYTG NLIAVFLAML FVFSNFPLIM AVLGDLFPRE QVSWATSIIW NGAVTGGNVL
GSLITGLLAQ YYEPIYGEVG ALEHALLIVL ILAFISSALW VVVPKPPKRS RIPLFG
|
|---|
| |