Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1254 |
Symbol | |
ID | 5709253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1324814 |
End bp | 1326262 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275760 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001541071 |
Protein GI | 159041819 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000000145561 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGTCTA AGCGATTCAT AGAGATGGTG GAACCGCTCT TAACGCTAAT GCCCACTGTC CCCAGGCCCA ATAGGCCGGT TACCCTGGGT AGTAGGCTAA TATGGACCTT CCTAGCGGCT ACAGTTTACC TACTCCTATC AGTAACGCCG CTATACGGTA TTGTGGCTTC ATCAAGTAGC CCGCTCTTCA ACCCGCTGGT GGCTATAATA TTCGCCTCAA CCAACGGTAC ATTGGCTCAA CTGGGTATAG GCCCAATAAT AATAGCTGGA ATAATAATGG AGCTTGTAGC CTTCTCTGAG TTAATGGATG TTGACTTAAA TGACCCTAAG GATCAAGCAA GGTTCACTGC ATTAACGAAG CTTGTAGCCG TGATAATAGC CATGTTTGAG GGAGCATTCA TAATGTCAAC CCACCAGTTA ACCGTAGCCA ACGCTGGATT AGCCTTCATT GTGTGGCTTC AAATGTTGTT CGGAGCCGTA ATAGTTATAC TGCTTGATGA CTTAATATCC AAGGGATGGG GTATTGGAAG CGGCATATCA TTATTCATAC TCATAAGCAT AATTAGGTCC ATTTTCCAAT CCACATTCAT GCCTGTAACC GTGGGTGCAG GGGAGTTACT AGGTATTATA CCTGCCCTAG TGGCTGCAGT ATACAGCGCC GCAGTATCCC ACACGCTTGC ACCATTATTA TCCATAGTTT ATAGATTCAA CCTACCCGGC CTAATAGGCT TAATCGCAAC AATAGTCCTA GGTGGCTTCA TAGCATACGT TGAGTTAATG GAGGTTAGGA TACCGTTATC CTTCGTGCAG TACGGTGGAT ACAAGATGTC GTACCCATTC AAGGTAATGT ACGTCTCAGT CCTACCCATA ATATTCACAG CATACACAGT GGCGTTAATA TATAATGGAC TCTACTTCAT TTGGACAACA TATAATCCCC ATAACGCTAA CGCATTATTA AATTCAATAG CCTGCATAAG GGTTATTACA ACCGCTAAAT TCGGTACTAT TAATGAACCA TGTCCATCAT CCTTAATATA CTACTTCACC GTGGTGCCGT ATAACATTAC CCCACAGTAC GTGGTGGTTC ACATACTCAT GTACGTCGTG CTCTCAGTGG TCTTCGCCTA CCTATGGGTT AATTTAGCTG GTTTAAGCGC CGAGGATCAG GCCAGGACCA TGGTTTCAAG CGGCTTATCA ATACCAGGCT TCAGGGCATC AGCGAGGTCG CTTGCAGTGC ACTTGAAGAG GTACGTTAAT TCACTAACCT TCACCAGCGG CTTACTGGCT GGTTTCATTG CAGCCCTTGG TGATGTATTA GGTGTATATG GTACTGGCAT AGGCCTAATA CTAATGGTGG AGATAATAAT ACAGTACTAC ACGATAGCGA TGCAGGAGCA GTTGTTTGAG GCTTATCCAG GGCTTAAGAG GATTCTAGGT GTTGAGTAA
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Protein sequence | MASKRFIEMV EPLLTLMPTV PRPNRPVTLG SRLIWTFLAA TVYLLLSVTP LYGIVASSSS PLFNPLVAII FASTNGTLAQ LGIGPIIIAG IIMELVAFSE LMDVDLNDPK DQARFTALTK LVAVIIAMFE GAFIMSTHQL TVANAGLAFI VWLQMLFGAV IVILLDDLIS KGWGIGSGIS LFILISIIRS IFQSTFMPVT VGAGELLGII PALVAAVYSA AVSHTLAPLL SIVYRFNLPG LIGLIATIVL GGFIAYVELM EVRIPLSFVQ YGGYKMSYPF KVMYVSVLPI IFTAYTVALI YNGLYFIWTT YNPHNANALL NSIACIRVIT TAKFGTINEP CPSSLIYYFT VVPYNITPQY VVVHILMYVV LSVVFAYLWV NLAGLSAEDQ ARTMVSSGLS IPGFRASARS LAVHLKRYVN SLTFTSGLLA GFIAALGDVL GVYGTGIGLI LMVEIIIQYY TIAMQEQLFE AYPGLKRILG VE
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