Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1199 |
Symbol | |
ID | 5708983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1263568 |
End bp | 1264917 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275703 |
Product | major facilitator transporter |
Protein accession | YP_001541016 |
Protein GI | 159041764 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.329766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000717058 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAGGA GCAGTGAATT AAGGAGGGTG CATTACTTAA TATTCATGAG CTTCGCCCTA GGCTTCCTAA TATGGGGTTT TGTATCAACC AGTGGAATAA TGACTATAGA CTACTTCAAG GATTACATAC CTAAGTGGCT CCTACCAGTC TCAGTGGTAC TTGGCTACAT ATTCGTAATG CTAGGCGACA CTGTGATGGG TTTCCTAACG GATAGGGTGG GTAGGAAGAG AATATTCATA TACACCATGA GCCTTTACAC CATTGGATTA CTGGGGATGG CTGCATCACT TTATGTTAAG CAGGTGATCA ATCCTCTGAT AGCCTTCATC ATCTTAATGG TATCCTACGC CCTGGCTGAA TTCGGCGTTG GTGGTGAAGA GCCACCAGCA TTAGCCGCTA TCTCGGAGCT TATGCCAAGT GGCAGTAGGG GTATGATGCT TGTGCTCACG CCCAATTTCG ATAATATTGG TGCAGCCCTA GCTGCAGCAG TGCTTTATGC CGCATTAGTT TACACCGGTT CCGCTAGTGT ATCATCAATA TACGCCATGA TTGGTTCAGC CCTAGTGGTG GTTTTCCTGA CTATACTGGT TAGGTTACGT ATACCTGAAT CAGTGAGGTG GCTTGAATCT AGGGGTAGGG TTAATGAGGC TGTTGAGATT GCCAAGAGGG AGGGTCTTGA ATACGCGTTG AGTTCAGGTA ACTCGGTGGT GCAGTTTAAG GCTCCACCAG CTTGGTATAG GGCATTATTC CTCTCAATAA TAGGCTTCAC TCAAATAACC ACCTATGGCT TAATGGCGTA CACAATAATT TACCTACCAT CATTACCCTT CAGTAACAAT TACAATCTAC AGGCACTGGT GATACTGTTG GCTAACCTAG GCGCCTCAAT AGCTGGCTTA GTGGGTTTAA TAATGGATAA GGTGGGTAGG AGACCATTCA CACTCTTCGC TTACCTAGGG GGCTTAGTAA CCATGGTACC CATATTCCTA ATATACGCAG CCTCCAATAC ACCATTAAAG GCATCACTAC CAGTATTCTA CACTCTACTC TTCCTCAACA TGGTCTTCAG TGAATTCGAA TGGGCTGTTA GAACTGTGCT TGAGCCTGAA TTATTCCCAA CTAGGGTTAG GGGAACCTGG ATTGGTGTGA TTAGGTTAAT AGCATGGGGA ATATACGTAG TGTTAACCTA CTACCTATTA AACATATTAA GCACATACCA GTACCTGCTC ACTAACCTAA TACTATACGC AATCGGGGCT GCCGCCGCAG TGACATGGTT CATTTACGGT ATTGAAACCA AGGGAATACC AATAAGCACC TTAGATAACA TAATGAGTAA ACAAAGTTGA
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Protein sequence | MNRSSELRRV HYLIFMSFAL GFLIWGFVST SGIMTIDYFK DYIPKWLLPV SVVLGYIFVM LGDTVMGFLT DRVGRKRIFI YTMSLYTIGL LGMAASLYVK QVINPLIAFI ILMVSYALAE FGVGGEEPPA LAAISELMPS GSRGMMLVLT PNFDNIGAAL AAAVLYAALV YTGSASVSSI YAMIGSALVV VFLTILVRLR IPESVRWLES RGRVNEAVEI AKREGLEYAL SSGNSVVQFK APPAWYRALF LSIIGFTQIT TYGLMAYTII YLPSLPFSNN YNLQALVILL ANLGASIAGL VGLIMDKVGR RPFTLFAYLG GLVTMVPIFL IYAASNTPLK ASLPVFYTLL FLNMVFSEFE WAVRTVLEPE LFPTRVRGTW IGVIRLIAWG IYVVLTYYLL NILSTYQYLL TNLILYAIGA AAAVTWFIYG IETKGIPIST LDNIMSKQS
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