| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1163 |
|---|
| Symbol | |
|---|
| ID | 5709622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1221108 |
|---|
| End bp | 1222064 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641275664 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_001540980 |
|---|
| Protein GI | 159041728 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTT ACATTAGGGA GGGGGAGGTG AATAAGTTAC TTACATATAA TGAGGCAATT
AAGGCCGTTG AGGATGGGTT TAGGTTACTT GGGTTAGGGA AGGCGGTTAA CTTACCTAGG
CGTAGGGTTG TGTTACCTAA TGCTATACTT CATGTTCTTC AAAGCGGTGT CTTAGGTGAC
TATAATGTTG CTGGTTTAAA GGCATACATG AGTACTAGGC AGGGGACTAG GTTCATTGTC
CTATTATTCA GCGTTGAGAC GGGGGAATTA TTAGCGATTA TTGAGGCTGA TAGGCTTGGG
CAAATTAGGA CAGGGGCAGC GTCTGTTGTG GCGAGTAAGT ATATGGCTAA CTCAATGAGT
GAATTAGGCA TAGTTGGTTC AGGTAGGCAG GCTAGGGCTC AGTTTGAGGC ATTCAACTCC
ACGGGCATGC TTAGGAGGGT TAAGGTGATT AGTAGGAGTA GGGCTAATGC CGAGGCATTC
GCATCCTACA TTAAGTCCAA TGGCGTTGAC GCAGTGATTG TTAATGATTA TAGGGAAGTA
TGCAAAGTTG ACGTCCTAGT GACCGCAACA AACTCAAGGG AACCATTCAT AAAGGGTGAA
TACCTAAGTG AAGGCATTCA CGTTAATGCA ATTGGAAGCA ACTGGAGGAA TAGGGCTGAA
TTAGCACCTG ATGCCGTTAA TAAGGCTGAT TTAATCGCCG TTGATGACCT GGAGCAGGCT
AAGGAGGAGG CAGGGGACTT AATAATGACT GGTGAGGCTG TTTGGGGTAG GGTGGTTAAA
TTATCGGATA TAGTTATAGG CAATGTTAAG GGCAGGGAGA ATTCGCAATC AATAACAATC
TTCAAGTCCC TGGGCATATC CATTGAGGAC ATTACCGTGG CTAAGCTAAT CTACGATAAG
GCCATTAAGG AGGGGATTGG AGTTAATATA GAGTTCAACG GAGTATTCAA CCCATAA
|
|---|
| Protein sequence | MTLYIREGEV NKLLTYNEAI KAVEDGFRLL GLGKAVNLPR RRVVLPNAIL HVLQSGVLGD
YNVAGLKAYM STRQGTRFIV LLFSVETGEL LAIIEADRLG QIRTGAASVV ASKYMANSMS
ELGIVGSGRQ ARAQFEAFNS TGMLRRVKVI SRSRANAEAF ASYIKSNGVD AVIVNDYREV
CKVDVLVTAT NSREPFIKGE YLSEGIHVNA IGSNWRNRAE LAPDAVNKAD LIAVDDLEQA
KEEAGDLIMT GEAVWGRVVK LSDIVIGNVK GRENSQSITI FKSLGISIED ITVAKLIYDK
AIKEGIGVNI EFNGVFNP
|
|---|
| |