Gene Cmaq_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1141 
Symbol 
ID5710191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1197981 
End bp1198280 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content42% 
IMG OID641275640 
ProductSAF domain-containing protein 
Protein accessionYP_001540958 
Protein GI159041706 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.80997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGGT TCGCGATACA TAATAAGGAG GATAACGTGG GGGTAGCCAT AGATGATATA 
AGTGCCGGGG AGGAGGCTCA CGGCGTATAC ATTGAGGATA AGTCCAATGG ACCTATAGTT
AAGGCTATTG AGGATATTCC ACTTGGCCAT AAGATTGCTT TAAGGGATAT TAAGGCTGGG
GAGAAGGTTA TTAAGTATGG TAGGGTAATT GGGGTTGCTG TGAAGGATAT TAAGGCTGGG
GAACATGTTC ATACACATAA TCTAAAATCA TTAAGGTGGG GTAACTTAAG TAAAAGGTGA
 
Protein sequence
MARFAIHNKE DNVGVAIDDI SAGEEAHGVY IEDKSNGPIV KAIEDIPLGH KIALRDIKAG 
EKVIKYGRVI GVAVKDIKAG EHVHTHNLKS LRWGNLSKR