| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1077 |
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| Symbol | |
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| ID | 5709565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1126871 |
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| End bp | 1128433 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641275577 |
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| Product | Na+ symporter |
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| Protein accession | YP_001540896 |
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| Protein GI | 159041644 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00128504 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.725494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGGA TTGCTGGTTG GGTATCATTC CTAGTACTCT TCGTAATCTT CGTGCTGCTG
GGCTTCTATG GGGCTAGGTG GCGTAGGGGT GATTTAAGTA GGCTTGATGA GTGGGCCTTA
GCAGGTAGGA GGTTAGGCAC GTTCCTGGTT TGGTTCCTAG TTGGCGCGGA CTTATACACG
GCATACACAT TCGTCGCCGT TCCCGCTGGC GTATTTGCGA AGGGTGCATT ATACTTCTTC
GCGGTACCCT ACGTGGCCAC TGTATTCGCA TTAGCCACGG CAGTTATGCC CCCTCTCTGG
GAGTGGTCTA GGAGGAGGGG TTACATTACG GCCGCTGACT TCGTTGAGGA TAGGTTTAAC
AGTAGGTTAT TGGCTGCATT AGTGGCGTTA ACTGGTATAG TGGCTGAGTT ACCTTACATT
GCGCTTCAAA TAGTGGGTAT GAGTGCTGTG TTAGCCGTTA TGCTGCTTAA TGTTGTCCCT
GGGGCTAGCC TTGAGTTTGT GAGTGACTTA GCCTTAACCA TAGCGTTCAT AATACTGGCG
GCCTTCACAT ACACCAGTGG TTTAAGGGGT GCTACCTTAA CGGCCGTGTT TAAGGATGCG
TTAATATTCC TAAGCATAAT AGCAATACTT ATTGCCGCAC CCATAGCCAT ACCAGGGGCA
TTCCACACAG CCTTCAAGGT AGCCTCAAGC CTAAACAGCG GTAAAGGCTT ACCCACAGGC
ACCAGTAGCC TTAATTCAGT ATTCTCCTCA GCCTACTTAT CACTTTGGGT TGGTAGTTCA
CTGGCGCTTT ACCTATACCC CCACTCCGTT AATGGAGCCT TAAGCGCCGA GAGTAGGCGT
AAACTAGCTG TGAGCACGGC CCTACTGCCA ATATACGGTA TTGGGCTTGC CTTACTGGCT
CTTTACGGAA TACTGGTTTA CGCTGATTCA CAGGCCCTTA ACATTATAAG GAGTTTCCCA
TCAACTGGGT ACGCCGCTGT AATTAAAGGT AACTTACCCA TACCAGCCCT AGCAGCCACA
ATACTGCCTG ATTGGTTAGC CGGGGTGGCG TTACTGGGCA TTTTCATTGG GGGTATGGTG
CCTGCGGCAA TTATGGCTAT GGCTCAGGCG AATTTACTGA CCAGGAATGT GGCTAGGTAT
GTGGTTAAAT TAACCCCCCA GGGCGAGGCC AGGTTGGCTA AGTGGGCTTC AGTTTTCTTT
AAGTTCCTTG CACTTGTCTT CGCCTTAATA CCGGCATTAG CCTCAGTGTC AATAAACCTT
CAACTACTTG GGGGAATAAT AATAACCCAA ACACTACCCC CAATATTCCT TGGCTTAGTC
ACTAATAGGT TTAATAAGTA TGCACTCATG GCTGGTTGGG CTTCGGGAAT ATTAACAGGT
GTATACATGT TTATCACTAG GTATATTGCA ACAAAGGGTG CCTCACCAAC ACTATACCCG
ATTGCAGGCC ACCTATACTA CATTGCCGTA TTAGCATTGG TAATAAACAT ACTAGTTACC
TTAGTCGGCA CCGCATTAGC TGTGTTAATT AAGAGAAGTG CCGTTAGTAA GGTTAAGGCA
TAG
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| Protein sequence | MIGIAGWVSF LVLFVIFVLL GFYGARWRRG DLSRLDEWAL AGRRLGTFLV WFLVGADLYT
AYTFVAVPAG VFAKGALYFF AVPYVATVFA LATAVMPPLW EWSRRRGYIT AADFVEDRFN
SRLLAALVAL TGIVAELPYI ALQIVGMSAV LAVMLLNVVP GASLEFVSDL ALTIAFIILA
AFTYTSGLRG ATLTAVFKDA LIFLSIIAIL IAAPIAIPGA FHTAFKVASS LNSGKGLPTG
TSSLNSVFSS AYLSLWVGSS LALYLYPHSV NGALSAESRR KLAVSTALLP IYGIGLALLA
LYGILVYADS QALNIIRSFP STGYAAVIKG NLPIPALAAT ILPDWLAGVA LLGIFIGGMV
PAAIMAMAQA NLLTRNVARY VVKLTPQGEA RLAKWASVFF KFLALVFALI PALASVSINL
QLLGGIIITQ TLPPIFLGLV TNRFNKYALM AGWASGILTG VYMFITRYIA TKGASPTLYP
IAGHLYYIAV LALVINILVT LVGTALAVLI KRSAVSKVKA
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