| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0817 |
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| Symbol | |
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| ID | 5708608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 856873 |
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| End bp | 858393 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275320 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001540642 |
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| Protein GI | 159041390 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCCCG TGAATATGGC TTTATTCGTT AGGCAGAGTT CCGGTCTTGT TAAGAGGGCC
TCACTGTGGG ATGCTGCAAT GCTTAACGTC GCTAACATGG GTGCTGGCTT AGCCGTATTC
ATAGGTATTA GCCCCTTTGT GATACCTGGT GCAGTATTAT GGTTATCAAG TATACTGACA
TTCATACTAA CCCTCCCACT GGTGATACTT TACACCTACT TCATAGCTAG GATACCTAGG
ACTGGTGGGG ATTACGTGTG GATCACCAGG AAGCTTCACG GAGGTTTAGG CTCAATCATG
GGTATTGCCC TAGCCTTCAA CATGCCTCCA TTCTTCGCAC TCTCAGCCTT CTTCTCCGTT
ACCACTGTGA ATAATGTGCT ATTGGTTATA GGGTACTCTC ATGGTCAACA AGACTTAATT
AAATTAGCAA ACATAGTATT CAGTACCAGT AATGCATGGT TTAACTACAC CATAGCCTTA
ATCGCATTCA TAATTATACT GTTAATTAAT ATAATTAGGC CTAGCGCCGG TTTCAAGTTA
ACCACAGCCT TAGGGGCATT AGCCTTAACA GGCACTGCAG CAGCAATGAT TGTTCTAGGC
TTCTCAATAC CAACCTTCCA CCAGAGTATT GGGCAATTCC TAAGGTACTT CAATCTAACT
AACCAGAGCG CATACACAGG CCCCTCCTTT AGCTTACCTG CAACATTATA CATGATACCG
TACTTCGCCT CATACGCCTA CATATGGCTC TACGCCGGGC CAGCCGTGGC CGCTGAGATA
AGGGATAGAC GGGGGCTATT GTATAATGAA ATCCTAGGAA GCGTAATAAC GGTAATCTTC
ATTACCCTAC CCTTCCTATT AATGGATTTA GCTGCGGGTT ACAGTTTCAA CATGACCTAT
TACCCAACCA GCATATACAA CTTCTGGAAT ATTGCAATAT ACTTAGCTCG CAATGAGGCA
TTACAATGGT TCATTGGCCT AGGTCTAATT GCCTGGGAGT TCTTCATAAT GGCCTTTGGC
GTAATAGTCT TCGCACGCTA CGTGTTCGCC TTCTCCTTCG ATAGGTTATT CCCAGAAATC
TTCTCAAGGC TTAATAAGTG GGGTTCACCA ATGTACGCCC ACTTACTTGA CTTAGCCGCC
ACAGCGGTCT TCCTGGCCTT CCCGATAATA AGCCCGAATG GGTATGAGGC ACTATACAGT
TATACACCAT TAGCCATAAT TTACTTAATA CTCGTATCAG TGGCTGGCAT TAAGGCTGCT
AGAGAGGAGG GGAATAAGGG GATGCTGGTT TCATCAGTAC TCTCACTAAT ACCTCTATCG
CTCCTAGGTT ATGAGGCATT CACGAACCCG TACTTTGGTG TTATTGAATC ATTAAAGCCG
CTGCAACCAT ATTACCCAGG ATTAGCCTAC GTGCTTGGCC TCATAGGATT AGGCGCAGTA
GTCTATACTG CATCTAAGTA CATTAACATG AAGAGGGGGA TAGATATAAC CCTAGTGTAT
AAGGAAATAC CACCTGAGTA A
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| Protein sequence | MVPVNMALFV RQSSGLVKRA SLWDAAMLNV ANMGAGLAVF IGISPFVIPG AVLWLSSILT
FILTLPLVIL YTYFIARIPR TGGDYVWITR KLHGGLGSIM GIALAFNMPP FFALSAFFSV
TTVNNVLLVI GYSHGQQDLI KLANIVFSTS NAWFNYTIAL IAFIIILLIN IIRPSAGFKL
TTALGALALT GTAAAMIVLG FSIPTFHQSI GQFLRYFNLT NQSAYTGPSF SLPATLYMIP
YFASYAYIWL YAGPAVAAEI RDRRGLLYNE ILGSVITVIF ITLPFLLMDL AAGYSFNMTY
YPTSIYNFWN IAIYLARNEA LQWFIGLGLI AWEFFIMAFG VIVFARYVFA FSFDRLFPEI
FSRLNKWGSP MYAHLLDLAA TAVFLAFPII SPNGYEALYS YTPLAIIYLI LVSVAGIKAA
REEGNKGMLV SSVLSLIPLS LLGYEAFTNP YFGVIESLKP LQPYYPGLAY VLGLIGLGAV
VYTASKYINM KRGIDITLVY KEIPPE
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