Gene Cmaq_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0723 
Symbol 
ID5710471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp757548 
End bp757907 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content45% 
IMG OID641275222 
Productribosomal protein L15 
Protein accessionYP_001540549 
Protein GI159041297 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000000571349 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAGTTAA AGTCAACGAA CCAGTACCTT AGGATGACTG TTAGGTTCCT TGAGAAGGCG 
CATAGACAGT ATAATGCAGC ACTCTGGGCT ACGGTGGCTG ACATTCTTAG TAAGCCTAGG
AGAAGTAGGG TTACTGTTAA TGTTGGTAAG TTAAATAGGC TACTTAATGA TGGTGATGTA
GTGGTTGTTC CAGGTAAGGT TCTTGGGGAT GGTGAATTAA GTAAAAAGGT AACGGTGGCT
GCCTGGGCCT TCTCTAAAAC AGCCATTGAT AAGATTAAGG CCGCTGGAGG TGAGGCGTTA
AGTATCCCAG AGCTTGTTAG GAGGATGCCT AAGCCGAGTG GCGTTAAGAT AATTACTTAA
 
Protein sequence
MELKSTNQYL RMTVRFLEKA HRQYNAALWA TVADILSKPR RSRVTVNVGK LNRLLNDGDV 
VVVPGKVLGD GELSKKVTVA AWAFSKTAID KIKAAGGEAL SIPELVRRMP KPSGVKIIT