| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0645 |
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| Symbol | |
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| ID | 5708896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 681444 |
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| End bp | 683504 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641275146 |
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| Product | hypothetical protein |
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| Protein accession | YP_001540475 |
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| Protein GI | 159041223 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.549524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTCA CCACAAGAAT TAGAATGATG ATTGCAGCAT TAATACTAGT GATGCTTTCC
TCACTAATAA CCAAGTACGC TCTAATAGCC TTAGTGCCCT TAATAATAAT CTTCAGGAAT
GACGCGGCTT TACTAGCCTT ATCAATTAGG CACAGTGTGG CGCCGCAGTT AGTGGTAAGG
GATAATTACA TTTATGATCC GATTAATAGA CTTGTTCACT CATTCCTACT GGCTGAACCT
ATTCATGACC TACTTAGGTT AAGTGAGGGT AAGTTCATTA ATCTAGTTAA TGAAATGCTG
CTTAGGTTAA ACCTATGCGA TAAATGCTAC ATAACATTCA TAGTAATTGG TGATAGGAAA
GTAATAAGGG TGTCCATGGT TGATGAACCC CCGTTTAATA ATTTTAAGTC GTTTCAATCC
AATGCGGTTA ATGTTCTGGA GGATTACTTC ATGGTTAAAC CAATAAAGGG TGAGGAACTT
AGGAACTTGG TGAATCAATC ACCATACCCT GTATCAAGCC TAATAATGGT GCTAACTATA
CCATTAATTA TTCTCCTACT ATTCGGAGTA TTAGGTATTG CACCTTGGTT GATATTCGCA
ATAATAGTGA TTAAGCAGTA CTTGAGTGGG AGGTTCACGG TTAATAATGG GCTTCTCTTC
AGTAGGATTA GTACTAGGAA TGAACTTATG ATGAGTAAGT TAACGCAAGC TGACGTTTAC
TCCTTGGCGA AGGCCTTCCA TAACACTATT AATGAGTACG CACTCGTAAT ATCAGGGAAC
AGTGAATTAT CAATGCTAGC CACCAGGGAG TATCATAAGG CCTCGGAGTC CCTTGTGGTT
AAGGAGAGGG GTAAGAGTTA CCCAGGTTTA CTATATTGGA GAAACGTAAT AGATAGGTTA
TCGTCGGGTG AATTACCATT AAGGTTAATG CTACTATGCA ATGGGGGATT TGAATACGTT
AATGCCACTA AGAGCAAGGT TGCATCATAC GCATTATGGG TTCCTGACGG CTTCCTACTG
AATGGTTTAT CACATGATGC TGCAGTATTC ATACCATTCA CTGGTGGTAG ATTAAGGGTA
AGCGAGGATA GTAGGGTTAT TAGGATTGGG GTTGATAGTC TTGGCAAACC TGTGGAGGTT
GACTTGGACT CCTTACCAGC AGGCCACATG TTATTACTGG GTCCCACTGG TATGGGTAAA
TCATGGGCTG CACGAACCAT ATTAGCTAGG TTAATTAAAA TGGGTTTAAG GATCATTGTA
ATTGATCCGC ATGGTGAATA CAGTAACTTA GGCCTACCTA TTATTGATGT TTCAGAACGT
TTCGTGGATT TCCTTAACCC TGTGGGTAAG ATTGAGGGTA AGGAGACTAT ACTAAGGGTT
GCCCAATCAA TATCCGAGGC ATTCAATATA AGTGACCTAG ACCTAATACT AAGTGATTTA
GGGGGCCTCA GTAACCATGG TGACTTCAAG GAAGTGTTCA GTAAGGCTGC GGAAACCACG
TATAATATTG AACTCTCATA CGTTTACAGC ATTATAGCTA GTAGCTTAGG TAAAAGAGGC
CTAATAACCC CTGAGGAGCT GAGACAGGGG GTGGTTTTAT CCTTTAAGTC AATACTACCT
AACCCTGAGT TAACAGCCTT CGCCATGAAC CAAGTCACAG CATACCTATA CTCAATGTTC
GCCGGTAAGG TGAGTAAGCT GAGTAATATC TTAGCTGTTG ATGAAGCTTA CTACGTCATG
GACAGTAGGT TAATGGAGCT CTACGTAAGG GGCCTTAGGA AATCGGGCCT AGGCGTAATG
CTAATAACCC AAACGTTAAC TAATGTGTCA AGTAGCCTAA TTCAGAACAT ACCCTTAATA
ATAATGATGG GTGGGCCTGA TTCCTATATA ATTGAATCCA TGAATTACCT TAAACTTGAC
CAGAATGAAT TCGAATGGCT TAGGTTAGGT TTAGCGCCTC ACATGATGGG GAATAGAAGT
AGAGCATTAC TTATAGAGGG ACCTGTAAGG AGGCAAGTAC TTGTGGATCT TGATCCAAGA
CTAAAACCTA TGAATAATTA A
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| Protein sequence | MIFTTRIRMM IAALILVMLS SLITKYALIA LVPLIIIFRN DAALLALSIR HSVAPQLVVR
DNYIYDPINR LVHSFLLAEP IHDLLRLSEG KFINLVNEML LRLNLCDKCY ITFIVIGDRK
VIRVSMVDEP PFNNFKSFQS NAVNVLEDYF MVKPIKGEEL RNLVNQSPYP VSSLIMVLTI
PLIILLLFGV LGIAPWLIFA IIVIKQYLSG RFTVNNGLLF SRISTRNELM MSKLTQADVY
SLAKAFHNTI NEYALVISGN SELSMLATRE YHKASESLVV KERGKSYPGL LYWRNVIDRL
SSGELPLRLM LLCNGGFEYV NATKSKVASY ALWVPDGFLL NGLSHDAAVF IPFTGGRLRV
SEDSRVIRIG VDSLGKPVEV DLDSLPAGHM LLLGPTGMGK SWAARTILAR LIKMGLRIIV
IDPHGEYSNL GLPIIDVSER FVDFLNPVGK IEGKETILRV AQSISEAFNI SDLDLILSDL
GGLSNHGDFK EVFSKAAETT YNIELSYVYS IIASSLGKRG LITPEELRQG VVLSFKSILP
NPELTAFAMN QVTAYLYSMF AGKVSKLSNI LAVDEAYYVM DSRLMELYVR GLRKSGLGVM
LITQTLTNVS SSLIQNIPLI IMMGGPDSYI IESMNYLKLD QNEFEWLRLG LAPHMMGNRS
RALLIEGPVR RQVLVDLDPR LKPMNN
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