Gene Cmaq_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0326 
Symbol 
ID5709126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp363797 
End bp364381 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content41% 
IMG OID641274829 
ProductpaREP15, putative coiled-coil protein 
Protein accessionYP_001540163 
Protein GI159040911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0971098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGTTA TTGCCTTGTG TGTGGAGTCT TTGTTGGGTG CCGTTATTGA TAAGTCGCTT 
GAGGCTGTTT TGAGGAAGTT GGAGAAGGGT GAGAGGCTTA AGACTGAGGA TTTGGTGGTT
TTGGTGTTAT CTACGGTGAG GGAGCAAAAC AGGAGGATAG ATGCGCTTAA TGATCAAGTT
AATAGGAGGA TTGATGAGGT GAGTAAGAGA ATTGATATGC TCAATGACCA GGTTAATAGG
AGGATTGAGG AGTTGAACAA GAGGATTGAT GCGTTAGCGG ATCAATTAAA TAGGAGGATT
GATGAGACCA ACAAGAGAAT TAATGAGACC AATAAGAGGA TTGACTCATT GAGTGAGCAG
GTTAATAAGA GAATTGATGA AACGAATAAG AGGATTGATG CCTTGAGTGA TCAAATAGGT
AGGAGGTTTG AGGAGTTGAA TATGAGGATT GATGGTGTGT ATAATGTGCT TGGTAATATT
CAGAGGACCC TTGTTGATAT GAGTAAGATT CTCATGGATC TTCAGAAAGT CATGCTTAGT
ATTCAGGCTT CTATATCGTC TCAATCGCAG AGGCAAACCC ACTAA
 
Protein sequence
MLVIALCVES LLGAVIDKSL EAVLRKLEKG ERLKTEDLVV LVLSTVREQN RRIDALNDQV 
NRRIDEVSKR IDMLNDQVNR RIEELNKRID ALADQLNRRI DETNKRINET NKRIDSLSEQ
VNKRIDETNK RIDALSDQIG RRFEELNMRI DGVYNVLGNI QRTLVDMSKI LMDLQKVMLS
IQASISSQSQ RQTH