| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0317 |
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| Symbol | rpl3p |
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| ID | 5710162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 354021 |
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| End bp | 355064 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641274821 |
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| Product | 50S ribosomal protein L3P |
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| Protein accession | YP_001540155 |
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| Protein GI | 159040903 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGGTTGA AGATTCATAG GCCTAGGAGA GGATCCATGG CCTACTACCC TAGGAAGAGG
GCCAGTGACA TAGTGCCTAG AATACGTAAT TGGCCTGTAA TTGACTTAGG TAAACCAACG
CTCCTTGGAT TCGTAGGATA TAAGGCAGGC ATGGTTCACG TTACCGTGGT GGATGATAGG
AAGACGAGTC CATTCTTCGG TAAGGAACTC GTTAAGGCCG TTACAGTGGT GGAGACTCCA
CCACTTTACG TGGTTGGTTT AAGGGCTTAC GCAATTAATC CCCTTAAGGC TGAATTAGTA
AGTGTTGGTG AGGCTTGGGT TAACATCCCC AATGAGGTGA GGAAGTATAT TGCGAGGAGG
ATACCTACAC TACCTGAGAA GTTTGATACT GATAAGGCTC TTGCAGACCT ACAGGGTTTA
CTCGACTCAG TGAGTTACAT TAAGGTTATT GCAATGACCC AGCCCTACAA GGCTGGTGTG
GGTAAGAAGA CCCCTGAGGT TCTTGAAATA CCAGTGGGTG GTGTACCAAC TATTGATGAG
CAGTTTAAGT ATGCCTCAGG TTTATTGGGT AAGGAGGTTA AGCCCACTGA CGTCTTCAAA
CCCGGTCAAC TGGTGGATGT TATCGGGGTC ACTAAGGGTA AGGGGACTCA GGGCGTGATT
AAGAGGTTTG GTGTTAAGGA GTTGCCTAGG TGGCATAAGC ATAGGAAGGG TTCTAGGAGG
ACTGGGACCG TTGGACCTAA GCCCGCTGTA ATGTATACTC AACCAAGGAT GGGGCAGATG
GGGTTCCATA GGCGCACTGA GTATAATAAG AGGATACTTA AAATAAGTGA TAATGGTTCT
GAAATAACAC CTAAGGGTGG GTTTAAGCAC TACGGCATAG TAAGGAGTGG TTACATGCTT
ATTGAAGGTT CAACACCAGG TGTGGTTAAG AGGCTTATAG CCTTCAGGTA CCCCATTAGG
CCGCCGTTTA ACTATGATCT TAAGCAGGTT CAGGCACCAA GCGTGACTTG GGTAAGCGTA
ATGGGTGTTA GTGGGGTGAG TTGA
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| Protein sequence | MGLKIHRPRR GSMAYYPRKR ASDIVPRIRN WPVIDLGKPT LLGFVGYKAG MVHVTVVDDR
KTSPFFGKEL VKAVTVVETP PLYVVGLRAY AINPLKAELV SVGEAWVNIP NEVRKYIARR
IPTLPEKFDT DKALADLQGL LDSVSYIKVI AMTQPYKAGV GKKTPEVLEI PVGGVPTIDE
QFKYASGLLG KEVKPTDVFK PGQLVDVIGV TKGKGTQGVI KRFGVKELPR WHKHRKGSRR
TGTVGPKPAV MYTQPRMGQM GFHRRTEYNK RILKISDNGS EITPKGGFKH YGIVRSGYML
IEGSTPGVVK RLIAFRYPIR PPFNYDLKQV QAPSVTWVSV MGVSGVS
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