Gene Cmaq_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0177 
Symbol 
ID5709337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp211504 
End bp212610 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content41% 
IMG OID641274680 
ProductATPase 
Protein accessionYP_001540016 
Protein GI159040764 
COG category[R] General function prediction only 
COG ID[COG1672] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.335522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA TATTCGGTAG GGAGATTCTT GACCCATCGG AATTCTATGA TAGGGAGGAG 
GAACTTAAGG TACTTATTAA TTCATTTAAG GTTAGGCAAC CAATTGCAGT TATAGGTTAT
AGGAGAATGG GGAAGTCGTC ATTAATTAAT GTTGCTCTTA AATTAATGGA TAATGAAGAT
ACAGTAACCG TTAAGGTGTC TTTAGAGGGG GTTAGAAGCA TTAGGCAGTT TCTCGACCTT
TACGTTAGTA GTATTCTTAC GGAGACCGTT AGGAAATCGA TTAGACTTAA ATTGAAGGTA
GACTTAATTA ACATTAGAGA TGCATTACAT GCATTACTCG GCGCTGTGAG GGAGGCTGGG
GTTAGGTTTA ATGGACTGGA CTTCTACGTT AGGCTTTACA CTGATGTGAT TGATTATAAG
GTTAACATGA TTAAGGCATT GGATGAATTC CTTCAAATGC CCCAGAAGAT TGCTGAGGAG
TTGGGTAAGA ACATGGTGAT TGCGCTTGAT GAATTCCAGC AGGTTAGGTT CCTTAAGCAA
CCGTACCCTG ATGTATTAAG GGTCATGAGG AGGATTTGGC AATCCCACAG CATGGTTGAG
TATGTGATCG CTGGGTCTGA GGTGGGTATT ATGAGGGAGT TACTGAGTAG GAGTGATCAA
CCCTTCTTCG CCTTCTTTAG GGTTATTGAA TTAAAGCCCT TTAATAAGGA CACCAGTATA
TCATTCCTAA GGGAGGGGCT TATGGAGAAT GGGGTGTATT GTGTAGGTGA AGTCTTAGAG
AAGGCTTATG AGTTAACGGG TGGTTTCCCA GCTTGGCTTA ACCTGGCTGG TTTAAGAATG
GTTGAGGGAG GCTGCGATAA GTGGTTTATA CTAAATGACC CAACAGTCAA ACTCATTATA
GAATCCGAGT TAAGTAGCCT TAACCATAAT CAACTTAGGC TCCTTAAGGC ATTAGCCATG
GGTATTAGGT TGAATAAGGC AAACGTTATG AAGCCTAACA GGGTTTTAAA TGAATTAATC
GCAAAGGGGC TTGTTGAGAA GACTGGGTGG GGTAGGTATA GGATTGTTGA CCCATTGTTG
GCGAATTACT TGAAGATTAA TGGTTAA
 
Protein sequence
MKFIFGREIL DPSEFYDREE ELKVLINSFK VRQPIAVIGY RRMGKSSLIN VALKLMDNED 
TVTVKVSLEG VRSIRQFLDL YVSSILTETV RKSIRLKLKV DLINIRDALH ALLGAVREAG
VRFNGLDFYV RLYTDVIDYK VNMIKALDEF LQMPQKIAEE LGKNMVIALD EFQQVRFLKQ
PYPDVLRVMR RIWQSHSMVE YVIAGSEVGI MRELLSRSDQ PFFAFFRVIE LKPFNKDTSI
SFLREGLMEN GVYCVGEVLE KAYELTGGFP AWLNLAGLRM VEGGCDKWFI LNDPTVKLII
ESELSSLNHN QLRLLKALAM GIRLNKANVM KPNRVLNELI AKGLVEKTGW GRYRIVDPLL
ANYLKING