| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0167 |
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| Symbol | |
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| ID | 5709651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 197028 |
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| End bp | 197756 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641274670 |
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| Product | exosome complex exonuclease 1 |
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| Protein accession | YP_001540006 |
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| Protein GI | 159040754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR02065] archaeal exosome-like complex exonuclease 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000393056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0873038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAAGC AGTCACCCAT ACCTTTGCTA ACTGATGGTA AGAGGGTTGA TGGTAGATTG
CCTGAAGAAC ATAGACCAGT TACAATGCAG GTTGGTGTAC TGCCTAATGC CAATGGTAGC
GCCCTAGTGG CTTACGGTAA CACTGTTGTT TTAGCCGCTG TGTATGGGCC TAGGGAACCA
ATACCAAGGT ACATAACTGT ACCGGATAAG GCCGTTGTCA GGGTTAGGTA CCATATGGCT
CCCTTCAGTA CCGATGATAG GAAGAACCCG GCCCCAACTA GGAGGGAGAT TGAGATTAGT
AAGGTTGTTA AGCAGGCCCT TGAAACAGTG GTGTTTCTGG AGCAGTACCC TAAGTCAACT
ATTGATGTTT TCCTAGAGGT TCTTCAAGCT GATGGAAGCA CTAGGGTTAC TTCAATAACG
GCAGCGTCCC TAGCCTTAGC TGATGCAGGC ATACCAATGA GGGATCTTGT TGTTGGGGTA
TCTGTGGGTA AGATTAATGA TACGGTTATT GTTGATTTAA ATAAGCTTGA GGATAATTAC
GGAGACGGTG ACTTACCCAT AGCCATAGCG TATAGGAAGA ATTGGGTACT CTTAATGCAG
CTTGATGGGG TGTGGAAGCC CAGTGAGGTT AAGAGGGGTC TTGAATTAGC CTTTAAGGCC
GCTGAAAACA TTTATAGGAA TATGAGGGAG GTTTTAAAGG GAAGATACAT GGCGGTGATT
CAACAATGA
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| Protein sequence | MAKQSPIPLL TDGKRVDGRL PEEHRPVTMQ VGVLPNANGS ALVAYGNTVV LAAVYGPREP
IPRYITVPDK AVVRVRYHMA PFSTDDRKNP APTRREIEIS KVVKQALETV VFLEQYPKST
IDVFLEVLQA DGSTRVTSIT AASLALADAG IPMRDLVVGV SVGKINDTVI VDLNKLEDNY
GDGDLPIAIA YRKNWVLLMQ LDGVWKPSEV KRGLELAFKA AENIYRNMRE VLKGRYMAVI
QQ
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