Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0086 |
Symbol | |
ID | 5710247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 102776 |
End bp | 104464 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641274589 |
Product | hypothetical protein |
Protein accession | YP_001539930 |
Protein GI | 159040678 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.876374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.238085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAATGC TGGCGCTATT TATTGCAGCA TTAATGCAAC CTCAGTTGGT TAACGTGACC CCAGTATCCT TTAATATGAC TATTGGTTCA GGAATGCCCA TGTACGGTTT ATTAATTAAT CCTAATTCAT CATACGTAAT CTACCTTAAT GGACCGGGGG TGCTCTATAT GGTGGCTAAT TCATCATTAG TAGTTATGAT TCATAACATG GTTCATGTGG TTAATGGCAG TGCTTCACTA GTCATTAAGC AGGGTGAGTC GCGTGTATTA TTCATTAATC ATAATAATTA CTCAGTTTAC TTATTCTACA TGTTTCAATA TAATAGTTCC AGTGAAGCAT TCTACTCCTA TAACCCAATT GGGGTTGCTG ACTACGGTGT GGCGTTATAT TATGGTGAAC CATTATTGGC TTACTCCTAT GAAACAAGTG AAGTATTGGG TGTAGCCTTC ATTAGGAGTC TTAATGTAAC TGATGTTAGG GGTGATTGCG GGGTTAAGGC TGGTGATGAT TATGCTGATA TTCAATTGAA TTCAATAGTA AAGGCCGGTG ACGGATACTA TATAGTTCAA GATGTTGTTA TACTTAATGG AACTGCAGCA TCAATTGTTG ATAATGTGTG GAACATAACA TCACTCAACG CCACCTTAAG TAATGTAATG GGTCTGGGAT CCATAGGCGA CTTCAATGGT CAACAATACT ACGCGTACAG TAGGGTTATA GGTGAATTAA AAACACCCTT TAACTTAACG TTAGCCATAA TGGTTAGTGG GGTTAATTCA GCTCACTTAA GCTTCGGTTA TGGTGTTCAA GGGTCATTAA TATGGTTTGA TAACGTTACA TTGATTAATG CAGGTAAACC AAGCATCATC GTTAATGGTT CAAGTTACGT TGAATTTGGT ATACCTATTG ACACTGAGTT AGTGTTAACT GGGCCAGTGT GTGGAATATG GGCTGTGGTT AAAAGTGTTA ATGCAACCTT CACGTTACTT CATAGGGTTA ATGAATCATA TTACCCGGCA CCGTACACGT GGGGTATTGG TACATTAACA GGTGAGGCTG TAGCTAATGC ATCAGCCCTA GTGAGTAATG GTGTTAACGT TCAGATTACT GGCAGCGCCT ACGAATACCC TGGACCATTA TACTACTATG TGCCTGTCTT CATATCATTA ATTAATGGAT CGGAATTTAT AATGGTTCCT AAAGGATACA TGCTTAATCT AACCCTAGGT AGATTAATTA CCGGTAATTC ATCAGTAATT AAACGCATTG AATTCGTGAT TAATGAGACG CGTATTATTA ATTCAAGTAG CGTAACTATT ATTGTTAATG GGCCAACTGA GGTAAGGGTA ATTTATAATC AATTATTTGA AGTGAAGTTA ATTGGGTTAA GCGGGAATGA GACGCCGTTA GTGTATTGGT ATCCTAAGGG GTATGTGCTT AAACTTAAGG AACCAAGGTA CTTGGGTTTA ATGGTGTTTA GAGGCTACTT ACTTAACAAT GGTACGCTAG TTAAGTATCC TGAAGCTACA TTGATAATTA ATGGTTCATT AACAATTAAG GTACTGTGGG GTAATGAAGT GAGTATAGGT ACCTTAACGG TAATGTACCT GGTGTTTCCT GTATTATCAT TATTAATGAT TATGATATTG ATTATGCTTA CCCTAAGTGA TGAAGGTAAT CGTCATTAG
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Protein sequence | MIMLALFIAA LMQPQLVNVT PVSFNMTIGS GMPMYGLLIN PNSSYVIYLN GPGVLYMVAN SSLVVMIHNM VHVVNGSASL VIKQGESRVL FINHNNYSVY LFYMFQYNSS SEAFYSYNPI GVADYGVALY YGEPLLAYSY ETSEVLGVAF IRSLNVTDVR GDCGVKAGDD YADIQLNSIV KAGDGYYIVQ DVVILNGTAA SIVDNVWNIT SLNATLSNVM GLGSIGDFNG QQYYAYSRVI GELKTPFNLT LAIMVSGVNS AHLSFGYGVQ GSLIWFDNVT LINAGKPSII VNGSSYVEFG IPIDTELVLT GPVCGIWAVV KSVNATFTLL HRVNESYYPA PYTWGIGTLT GEAVANASAL VSNGVNVQIT GSAYEYPGPL YYYVPVFISL INGSEFIMVP KGYMLNLTLG RLITGNSSVI KRIEFVINET RIINSSSVTI IVNGPTEVRV IYNQLFEVKL IGLSGNETPL VYWYPKGYVL KLKEPRYLGL MVFRGYLLNN GTLVKYPEAT LIINGSLTIK VLWGNEVSIG TLTVMYLVFP VLSLLMIMIL IMLTLSDEGN RH
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