Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0042 |
Symbol | |
ID | 5709359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 57724 |
End bp | 58605 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274545 |
Product | proliferating cell nuclear antigen |
Protein accession | YP_001539886 |
Protein GI | 159040634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.512471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGG AGAACGAGGA GGAGAGGAGG GAAGAGGAAG CTGAGACTGA GGAGGCAGAG GGTGAGACTG GGGGTGGTTC AATAGTTCAG GAGAGTGGGG AAAGTGGGGT TGTTTACACA TTTACGTTTC CTAAGGGTAG GGATGTTAGG TATGTTTTCC TAAGTCTGGC TCAAGTTCTA AATGAGGCTT TATTCGTCAT GAGTCCTGAT GGTATTAGCC TCAAGGCTAT TGATTCATCT AAGGTTTCCC TAGTGCTCCT TAACATACCT TCAACAGCCC TTGAGGAAGT TAACATAACT GACACTGTTA AGGTTGGTGT TCTATTTGAT ACCATTAAGA AGCTGGCTAA GAGAATTAGG GCTAAGGATA AAGTTGACAT AGGTGTTGAT AAGGGGAGGA ACAGGTTCCT AATGATAATA TACTATGGTT CTAAGGGGCG GGAAAGCGGT ATGTATAGGA AATTCTACTT ACCGATTGTT GATGTTACTC AGGAGGAGAT ACCGGAGCCG AAGATTGATT ACCCTGTTAG GATACGGATG AGCATGGATG CATTCAAGGA TGCCTTAACA ATGGCTGAGG ACATAAGTGA CGCAGTCACA TTCACCGTTG ACCCAGAGTC ATTCACCATA AAGGCCTCCG GTGAGGGGGG TAGGTATTAT GAGGTTCAGT ATCAAAGCAC TGATGAATCC TTCCAGGAAT TCTCAGTGAG TGAGAAGCAG GAGGCGTCCT ATTCCCTTGA TTACATAATG AACATGAATA GGCAAATGGC CCCAATATGT GAATACGTTA CCATAGAATT CGCCACTAAT AAACCCATTA AGTTAACCTA CGAGTTCGCG TCAGGTTCAT TAACATACTA TGTAGCTCCA AGATCCCTGT AG
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Protein sequence | MPEENEEERR EEEAETEEAE GETGGGSIVQ ESGESGVVYT FTFPKGRDVR YVFLSLAQVL NEALFVMSPD GISLKAIDSS KVSLVLLNIP STALEEVNIT DTVKVGVLFD TIKKLAKRIR AKDKVDIGVD KGRNRFLMII YYGSKGRESG MYRKFYLPIV DVTQEEIPEP KIDYPVRIRM SMDAFKDALT MAEDISDAVT FTVDPESFTI KASGEGGRYY EVQYQSTDES FQEFSVSEKQ EASYSLDYIM NMNRQMAPIC EYVTIEFATN KPIKLTYEFA SGSLTYYVAP RSL
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